Gene PA14_12780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12780 
Symbol 
ID4381996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1095964 
End bp1096593 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content60% 
IMG OID639323580 
Productputative two-component response regulator 
Protein accessionYP_789169 
Protein GI116051988 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000436161 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCG TCCTGATCGT CGACGACCAC CCCGTCATCC GCCTCGCCGT GCGCGTCCTG 
CTGGAAAAGC ATGGTTTGCA GGTGGTGGCC GAGACGGACA ATGGCGTGGA TGCCATCCAG
TTGGTCCGGG AGCACGAACC GGACGTGGTG ATTCTCGACA TCGGCATTCC CAAGCTCGAC
GGCCTGACCG TGATCTCGCG GATCAAGTCG CTGGAACTGC GCACCCAGGT GCTGGTACTC
ACTTCACAAT CCGCAGAGGC GTTCTGCAAG CGCTGTATCC AGGTCGGCGC CCGTGGGTTC
GTCAACAAGG AAGAAGACCT GAACAACCTG ATCAACGCCC TGAACGCCGT GATCGCTGGC
TACACGTTCT TTCCTTCGCT CACGTTCGAT ACCCTCGGCA CCCCGCCGGA GCGCATTTCC
GAAAGCGAGC TTATCGGCCT GCTCTCCGAC CGCGAGATGA TCGTCCTCCA GCATCTCGCC
ATGGGCTATT CGAACAAGGC CATCGGCGAG AAGCTGTTCC TCAGCAACAA GACCGTCAGC
ACCTACAAGA CCCGCCTGCT GCAGAAGCTC GGCCTGGGTT CGCTGGTCGA CCTCGCAGAG
TTCGCCAAGC GCAATTCGCT GATCCACTGA
 
Protein sequence
MHTVLIVDDH PVIRLAVRVL LEKHGLQVVA ETDNGVDAIQ LVREHEPDVV ILDIGIPKLD 
GLTVISRIKS LELRTQVLVL TSQSAEAFCK RCIQVGARGF VNKEEDLNNL INALNAVIAG
YTFFPSLTFD TLGTPPERIS ESELIGLLSD REMIVLQHLA MGYSNKAIGE KLFLSNKTVS
TYKTRLLQKL GLGSLVDLAE FAKRNSLIH