Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5375 |
Symbol | |
ID | 8329577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6387312 |
End bp | 6387968 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945812 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003103040 |
Protein GI | 256379380 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCGG TGCGACCGCT GCGGGTGCTG GTGGTGGACG ACCACCCGAT GTTCCGGTTC GGGCTGTCGG CGGTGCTGGC GTCCTCACCG GAGATCACCG TGGTCGGCGA GGCGTCGGGC GGCGGGATGG GCGTCGAGCT GGCGGCGGCG CTGCGGCCGG ACGTGGTCGT GATGGACCTG AACATGCCGG ACCTGGGCGG GGTGGAGGCG ACGCGGCGCG TCGTGGCCGA GCACCCCGGC GCGCGGGTCC TGGTGCTGAC GATGTTCGAC GACGACGACT CGGTGTTCGC GGCGATGCGC GCGGGCGCGC TCGGCTACCT GCTGAAGGCC TCGCAGCCGC AGCAGATCGT GCGGGCGGTG CGGGCGGTGT CCGAGGGCGA GGCGATCTTC AGCCCGGCGA TCGCGGGCCG GTTGCTGGCG TACTTCGGCG CACCCGCGCA GCCGCGTCCC GAGACGTTCC CGGAGCTGAC GTCGCGGGAG CGCGAGGTGC TGCGGCTGAT GGCAGGCGGC GAGGGCAACG GGGCGATCGC GCGGGGGCTG GTGCTGAGCC CGAAGACGGT GCGCAACCAC GTGTCGAACA TCCTGCGGAA GCTGCACGTG GCCGACCGGG CGGAAGCGGT GGCGCGGGCC CGCGAGGCCG GGATGGGACA ACGATGA
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Protein sequence | MSAVRPLRVL VVDDHPMFRF GLSAVLASSP EITVVGEASG GGMGVELAAA LRPDVVVMDL NMPDLGGVEA TRRVVAEHPG ARVLVLTMFD DDDSVFAAMR AGALGYLLKA SQPQQIVRAV RAVSEGEAIF SPAIAGRLLA YFGAPAQPRP ETFPELTSRE REVLRLMAGG EGNGAIARGL VLSPKTVRNH VSNILRKLHV ADRAEAVARA REAGMGQR
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