More than 300 homologs were found in PanDaTox collection
for query gene Jden_0656 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  100 
 
 		 218 aa  432  1e-120  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  79.05 
 
 		 220 aa  294  5e-79  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  72.15 
 
 		 226 aa  294  8e-79  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  73.85 
 
 		 217 aa  293  1e-78  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  73.36 
 
 		 228 aa  288  4e-77  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  71.89 
 
 		 232 aa  283  2.0000000000000002e-75  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  72.43 
 
 		 226 aa  283  2.0000000000000002e-75  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  68.52 
 
 		 233 aa  278  5e-74  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  66.82 
 
 		 212 aa  277  1e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  67.14 
 
 		 223 aa  274  8e-73  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  66.98 
 
 		 210 aa  270  1e-71  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  64.95 
 
 		 212 aa  269  2e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  63.08 
 
 		 228 aa  261  8e-69  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  63.08 
 
 		 228 aa  259  2e-68  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  61.47 
 
 		 228 aa  259  2e-68  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  61.74 
 
 		 226 aa  258  4e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  60.81 
 
 		 219 aa  258  7e-68  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  61.68 
 
 		 217 aa  256  1e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  66.52 
 
 		 228 aa  251  4.0000000000000004e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  61.01 
 
 		 229 aa  250  9.000000000000001e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  61.64 
 
 		 216 aa  250  1e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  64.38 
 
 		 218 aa  250  1e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  65.61 
 
 		 229 aa  248  4e-65  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  66.07 
 
 		 232 aa  246  2e-64  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_1769  putative response regulator  60.54 
 
 		 231 aa  244  9.999999999999999e-64  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  62.79 
 
 		 227 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  60.19 
 
 		 231 aa  230  1e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  58.6 
 
 		 223 aa  224  8e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  58.45 
 
 		 223 aa  223  1e-57  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.05 
 
 		 253 aa  145  6e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  43.13 
 
 		 216 aa  142  4e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.81 
 
 		 234 aa  142  5e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  38.39 
 
 		 231 aa  140  9.999999999999999e-33  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  38.91 
 
 		 237 aa  140  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  39.46 
 
 		 250 aa  140  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  42.72 
 
 		 219 aa  138  6e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  39.25 
 
 		 218 aa  138  6e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  38.46 
 
 		 237 aa  137  8.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.76 
 
 		 216 aa  136  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  38.91 
 
 		 238 aa  137  2e-31  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.74 
 
 		 303 aa  137  2e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  38.99 
 
 		 216 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  40.65 
 
 		 217 aa  134  8e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  37.95 
 
 		 236 aa  134  9e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  37.9 
 
 		 234 aa  134  9.999999999999999e-31  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.19 
 
 		 213 aa  132  5e-30  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  36.49 
 
 		 242 aa  131  6e-30  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  36.77 
 
 		 243 aa  131  6.999999999999999e-30  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  35.81 
 
 		 221 aa  130  1.0000000000000001e-29  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  36.87 
 
 		 211 aa  130  1.0000000000000001e-29  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  38.07 
 
 		 217 aa  130  2.0000000000000002e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  38.07 
 
 		 217 aa  130  2.0000000000000002e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  40.19 
 
 		 222 aa  128  5.0000000000000004e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  38.91 
 
 		 223 aa  128  6e-29  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  38.91 
 
 		 223 aa  128  6e-29  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  34.86 
 
 		 218 aa  127  1.0000000000000001e-28  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  36.17 
 
 		 236 aa  127  1.0000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40.47 
 
 		 219 aa  127  1.0000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  41.06 
 
 		 227 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  34.29 
 
 		 231 aa  126  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  36.67 
 
 		 219 aa  126  2.0000000000000002e-28  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  35.65 
 
 		 218 aa  126  3e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  38.29 
 
 		 223 aa  126  3e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40 
 
 		 218 aa  126  3e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  36.28 
 
 		 215 aa  125  5e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  37.86 
 
 		 225 aa  125  6e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  38.94 
 
 		 217 aa  124  7e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  35.02 
 
 		 217 aa  124  8.000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  39.42 
 
 		 234 aa  124  8.000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.92 
 
 		 217 aa  124  9e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  39.07 
 
 		 219 aa  124  9e-28  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  36.36 
 
 		 213 aa  124  9e-28  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  35.09 
 
 		 225 aa  124  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.91 
 
 		 241 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  38.21 
 
 		 215 aa  124  1e-27  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.132796 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  36.97 
 
 		 218 aa  123  2e-27  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  33.8 
 
 		 217 aa  123  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008781  Pnap_3764  two component LuxR family transcriptional regulator  36.8 
 
 		 232 aa  123  2e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  36.97 
 
 		 218 aa  123  2e-27  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  37.62 
 
 		 221 aa  122  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  38.89 
 
 		 207 aa  122  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  34.76 
 
 		 212 aa  122  4e-27  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  40.18 
 
 		 223 aa  122  4e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  39.02 
 
 		 226 aa  121  6e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  33.81 
 
 		 213 aa  121  7e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  37.38 
 
 		 235 aa  121  8e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  39.02 
 
 		 220 aa  121  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  35.48 
 
 		 222 aa  120  9.999999999999999e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.64 
 
 		 212 aa  120  9.999999999999999e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  35.51 
 
 		 219 aa  120  9.999999999999999e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  35.91 
 
 		 236 aa  120  9.999999999999999e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  38.79 
 
 		 218 aa  120  1.9999999999999998e-26  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  38.79 
 
 		 218 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  38.79 
 
 		 218 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.94 
 
 		 226 aa  120  1.9999999999999998e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  38.65 
 
 		 207 aa  120  1.9999999999999998e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  34.23 
 
 		 214 aa  120  1.9999999999999998e-26  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  36.49 
 
 		 214 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  36.52 
 
 		 240 aa  120  1.9999999999999998e-26  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  39.09 
 
 		 249 aa  119  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
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