More than 300 homologs were found in PanDaTox collection
for query gene Caci_6044 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  100 
 
 		 226 aa  438  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  70.54 
 
 		 229 aa  292  3e-78  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  69.86 
 
 		 233 aa  291  5e-78  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  68.78 
 
 		 212 aa  285  5.999999999999999e-76  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  68.95 
 
 		 223 aa  284  9e-76  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  68.64 
 
 		 210 aa  282  3.0000000000000004e-75  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  68.78 
 
 		 212 aa  280  1e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  68.61 
 
 		 216 aa  277  8e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  66.08 
 
 		 219 aa  272  4.0000000000000004e-72  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  65.77 
 
 		 217 aa  271  9e-72  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  67.57 
 
 		 228 aa  268  5e-71  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  67.12 
 
 		 228 aa  267  1e-70  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  65.78 
 
 		 229 aa  265  5e-70  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  66.37 
 
 		 232 aa  261  6e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  63.84 
 
 		 226 aa  259  3e-68  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  63.39 
 
 		 228 aa  254  7e-67  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  63.32 
 
 		 223 aa  253  1.0000000000000001e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  65.92 
 
 		 227 aa  253  2.0000000000000002e-66  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  62.83 
 
 		 218 aa  251  5.000000000000001e-66  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  63.84 
 
 		 231 aa  249  2e-65  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  63.48 
 
 		 217 aa  249  2e-65  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  61.3 
 
 		 218 aa  248  7e-65  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  64.14 
 
 		 228 aa  246  1e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  64.89 
 
 		 220 aa  246  3e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  57.87 
 
 		 231 aa  240  2e-62  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  61.84 
 
 		 226 aa  238  5e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  56.67 
 
 		 228 aa  232  4.0000000000000004e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  57.71 
 
 		 223 aa  226  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  59.34 
 
 		 232 aa  225  5.0000000000000005e-58  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  44.69 
 
 		 218 aa  168  7e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  43.11 
 
 		 216 aa  158  8e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.86 
 
 		 216 aa  154  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  38.63 
 
 		 243 aa  150  2e-35  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  42.79 
 
 		 219 aa  149  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  40.17 
 
 		 223 aa  149  4e-35  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  42.92 
 
 		 217 aa  149  4e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  35.75 
 
 		 221 aa  149  4e-35  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  40.17 
 
 		 223 aa  149  4e-35  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  40.87 
 
 		 223 aa  148  6e-35  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  41.52 
 
 		 216 aa  146  3e-34  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  43.48 
 
 		 218 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.7 
 
 		 253 aa  145  6e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.33 
 
 		 234 aa  144  9e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  37.67 
 
 		 236 aa  143  3e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  39.82 
 
 		 242 aa  142  4e-33  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.43 
 
 		 213 aa  142  4e-33  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  38.64 
 
 		 213 aa  142  4e-33  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  38.77 
 
 		 234 aa  141  7e-33  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  36.12 
 
 		 237 aa  141  8e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  36.56 
 
 		 237 aa  141  8e-33  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  36.04 
 
 		 217 aa  140  1.9999999999999998e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  38.64 
 
 		 250 aa  140  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.05 
 
 		 303 aa  140  1.9999999999999998e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  39.56 
 
 		 230 aa  139  3e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  42.08 
 
 		 222 aa  139  4.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  36.44 
 
 		 227 aa  137  1e-31  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.04 
 
 		 216 aa  137  1e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  39.81 
 
 		 230 aa  137  2e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.94 
 
 		 212 aa  137  2e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  37.16 
 
 		 231 aa  137  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  40.09 
 
 		 217 aa  137  2e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  36.4 
 
 		 222 aa  135  3.0000000000000003e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.9 
 
 		 238 aa  136  3.0000000000000003e-31  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  35.27 
 
 		 218 aa  135  5e-31  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  35.27 
 
 		 218 aa  135  5e-31  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  42.34 
 
 		 223 aa  135  6.0000000000000005e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  41.12 
 
 		 225 aa  134  8e-31  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  39.37 
 
 		 221 aa  134  9e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.91 
 
 		 226 aa  134  9.999999999999999e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  36.99 
 
 		 256 aa  134  9.999999999999999e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal  1 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  41.28 
 
 		 249 aa  134  9.999999999999999e-31  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  35.81 
 
 		 223 aa  134  1.9999999999999998e-30  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  39.71 
 
 		 213 aa  133  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40 
 
 		 219 aa  132  3e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  37.39 
 
 		 222 aa  132  3.9999999999999996e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.36 
 
 		 225 aa  132  5e-30  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  36.61 
 
 		 219 aa  132  5e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  42.73 
 
 		 220 aa  132  5e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.75 
 
 		 217 aa  132  6e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  39.3 
 
 		 234 aa  132  6e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  41.67 
 
 		 225 aa  131  6.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  39.73 
 
 		 207 aa  131  6.999999999999999e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  38.14 
 
 		 244 aa  131  6.999999999999999e-30  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  38.5 
 
 		 216 aa  131  7.999999999999999e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  37.27 
 
 		 215 aa  131  9e-30  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  35.34 
 
 		 231 aa  130  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  37.84 
 
 		 218 aa  130  1.0000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal  1 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  35 
 
 		 241 aa  130  1.0000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  30.67 
 
 		 215 aa  130  1.0000000000000001e-29  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  37.1 
 
 		 233 aa  130  2.0000000000000002e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  38.43 
 
 		 213 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  33.78 
 
 		 217 aa  130  2.0000000000000002e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  36.16 
 
 		 219 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  35.43 
 
 		 215 aa  129  3e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.132796 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  36.74 
 
 		 227 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009921  Franean1_3835  two component LuxR family transcriptional regulator  39.53 
 
 		 217 aa  129  3e-29  Frankia sp. EAN1pec  Bacteria  normal  0.760782  normal  0.0940778 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  39.11 
 
 		 226 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  39.09 
 
 		 218 aa  128  6e-29  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  39.09 
 
 		 218 aa  128  6e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  32.11 
 
 		 219 aa  128  6e-29  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
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