More than 300 homologs were found in PanDaTox collection
for query gene Gbro_1737 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_1737  regulatory protein LuxR  100 
 
 
231 aa  453  1.0000000000000001e-126  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  85.71 
 
 
223 aa  355  2.9999999999999997e-97  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  68.69 
 
 
212 aa  275  4e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  68.84 
 
 
219 aa  274  7e-73  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  71.16 
 
 
228 aa  273  1.0000000000000001e-72  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  69.77 
 
 
217 aa  273  2.0000000000000002e-72  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  70.7 
 
 
228 aa  273  2.0000000000000002e-72  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  67.61 
 
 
210 aa  272  4.0000000000000004e-72  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  71.03 
 
 
216 aa  271  9e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  68.22 
 
 
212 aa  269  2.9999999999999997e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  69.63 
 
 
229 aa  268  4e-71  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  68.2 
 
 
218 aa  261  4.999999999999999e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  65.73 
 
 
233 aa  258  4e-68  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  64.95 
 
 
223 aa  254  6e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  62.84 
 
 
226 aa  246  3e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  62.22 
 
 
226 aa  245  4e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  59.05 
 
 
228 aa  238  4e-62  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  62.79 
 
 
229 aa  234  6e-61  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  63.72 
 
 
232 aa  232  5e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  60.09 
 
 
226 aa  230  1e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  62.22 
 
 
228 aa  230  2e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  58.33 
 
 
228 aa  226  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  60.38 
 
 
218 aa  225  5.0000000000000005e-58  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.214241 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  64.02 
 
 
227 aa  225  5.0000000000000005e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  61.5 
 
 
217 aa  224  6e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  60.63 
 
 
232 aa  224  1e-57  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  63.68 
 
 
220 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  59.91 
 
 
223 aa  215  5.9999999999999996e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  54.42 
 
 
231 aa  209  3e-53  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  42.92 
 
 
242 aa  153  2e-36  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  41.78 
 
 
213 aa  145  7.0000000000000006e-34  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  42.65 
 
 
218 aa  144  1e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.86 
 
 
253 aa  144  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  41.55 
 
 
237 aa  142  3e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.65 
 
 
221 aa  142  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  42.86 
 
 
223 aa  142  4e-33  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  41.87 
 
 
234 aa  142  6e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  37.32 
 
 
217 aa  140  9.999999999999999e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  43.33 
 
 
216 aa  140  1.9999999999999998e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.53 
 
 
234 aa  139  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  42.18 
 
 
216 aa  139  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  39.9 
 
 
303 aa  139  3.9999999999999997e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  41.06 
 
 
237 aa  139  4.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  40.93 
 
 
223 aa  137  8.999999999999999e-32  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  40.93 
 
 
223 aa  137  8.999999999999999e-32  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.51 
 
 
216 aa  137  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  43.14 
 
 
227 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  43.06 
 
 
219 aa  135  5e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  37.28 
 
 
231 aa  135  6.0000000000000005e-31  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  38.35 
 
 
231 aa  134  8e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  39.05 
 
 
241 aa  135  8e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.42 
 
 
238 aa  134  9.999999999999999e-31  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  39.72 
 
 
210 aa  134  9.999999999999999e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  41.43 
 
 
214 aa  133  1.9999999999999998e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  42.57 
 
 
215 aa  133  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  42.08 
 
 
217 aa  133  1.9999999999999998e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  39.72 
 
 
210 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  41.83 
 
 
213 aa  133  3e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  39.72 
 
 
210 aa  132  3.9999999999999996e-30  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  39.72 
 
 
210 aa  132  6e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  39.3 
 
 
213 aa  132  6.999999999999999e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_006274  BCZK1321  response regulator  39.72 
 
 
210 aa  132  6.999999999999999e-30  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  39.3 
 
 
226 aa  131  6.999999999999999e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  39.72 
 
 
210 aa  131  7.999999999999999e-30  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  38.68 
 
 
210 aa  131  9e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  44 
 
 
220 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  43.14 
 
 
219 aa  130  1.0000000000000001e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.58 
 
 
215 aa  130  1.0000000000000001e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  40.3 
 
 
220 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  40.69 
 
 
221 aa  130  2.0000000000000002e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  37.5 
 
 
212 aa  130  2.0000000000000002e-29  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.84 
 
 
250 aa  130  2.0000000000000002e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.65 
 
 
216 aa  130  2.0000000000000002e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  41.63 
 
 
223 aa  129  3e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  37.32 
 
 
217 aa  129  3e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  38.97 
 
 
233 aa  129  3e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  39.81 
 
 
209 aa  129  3e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  39.42 
 
 
228 aa  129  3e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  38.39 
 
 
213 aa  129  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.06 
 
 
236 aa  129  3e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  41.09 
 
 
214 aa  129  4.0000000000000003e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  42.36 
 
 
227 aa  129  5.0000000000000004e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  39.15 
 
 
219 aa  129  5.0000000000000004e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  37.8 
 
 
215 aa  128  6e-29  Burkholderia phymatum STM815  Bacteria  normal  normal  0.132796 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  42.11 
 
 
219 aa  128  7.000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  40.78 
 
 
230 aa  128  8.000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  42.92 
 
 
222 aa  128  9.000000000000001e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.06 
 
 
226 aa  128  9.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  41.87 
 
 
226 aa  128  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  37.02 
 
 
256 aa  127  1.0000000000000001e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  34.36 
 
 
224 aa  127  1.0000000000000001e-28  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  37.44 
 
 
220 aa  127  1.0000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  37.56 
 
 
217 aa  127  1.0000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  34.36 
 
 
224 aa  126  2.0000000000000002e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  41.23 
 
 
217 aa  126  2.0000000000000002e-28  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
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