Gene Aaci_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0516 
Symbol 
ID8424006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp573068 
End bp573763 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content51% 
IMG OID645026641 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003183960 
Protein GI258510526 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACAT GGCAAGATGA GAGCGTAATC AAAGTCTTAG TGGTTGATGA TCACGAGTTA 
TTTCGGCGTG GGGTCGTAAC AGTGCTTCGT TCGACACCAG GGATCTACGT CGTAGGAGAG
GCGGGAAATG GCCGTGAAGC GATCGAATGC TTTCAGACGC TGCAACCGGA CGTTACGCTT
CTAGATATTC ACATGCCCGT GTGCAACGGT CTGGAAACAG CCCGAAAGAT GCGAGAAGCA
AATCCGAACA CGAAGATCCT CATGCTGACG GTGTCGGAAA CAGAGGAGAT GCTGTTCGAA
GCTGTGAAAA GTGGAGCGTC TGGGTATGTG TTGAAATCGG TAAGTCCAGA ACGGTTGATC
GAGTGTGTTC GTCAAGTCTA TGAGGGGGAA CCTGTCGTTC CGAGCAGCCT TGCGATGAAA
ATGATTGCTG AATTCTCACG TACTGCTGAG ACACGTATGC CTTCCAGTGA GTCGGTAACG
GAATTGACGG AGCGCGAACG AGAAGTTCTT CAATATCTTA GTGCGGGGGC CAGCAACAAA
GAAATTGCCC GGGCACTTTT CATTAGTGAA AACACAGTTC GCAATCATGT TCGGCACATC
CTAGACAAGT TGCATTTGTC GAATCGCGCT CAAGCTGCCG CATACGCGGT GCGCAATGGT
ATTGCTCGAG GGCGTCAACT TACAAGCGAT GTATGA
 
Protein sequence
MGTWQDESVI KVLVVDDHEL FRRGVVTVLR STPGIYVVGE AGNGREAIEC FQTLQPDVTL 
LDIHMPVCNG LETARKMREA NPNTKILMLT VSETEEMLFE AVKSGASGYV LKSVSPERLI
ECVRQVYEGE PVVPSSLAMK MIAEFSRTAE TRMPSSESVT ELTEREREVL QYLSAGASNK
EIARALFISE NTVRNHVRHI LDKLHLSNRA QAAAYAVRNG IARGRQLTSD V