| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3824 |
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| Symbol | |
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| ID | 5060302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4381347 |
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| End bp | 4382033 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476082 |
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| Product | response regulator receiver |
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| Protein accession | YP_001160633 |
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| Protein GI | 145596336 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.206519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC AGACGGCGGG CGCAGCGGCG GACGCGGGTG CTGCCACGCG GCGGCTGCGG
GTCTTTCTTG TTGACGATCA CGCGATGTTT CGGGCCGGAG TCCGCGCCGA GCTGGGTGCG
CATGTCGACG TGGTGGGCGA GGCGAGCACG GTGGGGGAGG CGGTCAGCCG GATCGCCGCG
ACCGAACCCG ACGTGGTGCT GCTCGACGTG CACATGCCGG AGGGGGGTGG CCGGGCGGTG
CTCGAGGCCA TCCGGCGCAC GTACCCGCAC GTGCGGTTCC TCGCGCTCAG TGTCTCGGAC
GCGGCCGAGG ACGTGATCGG GCTGATCCGC GCTGGCGCCC GTGGCTATGT CACCAAGACG
ATCTCCCCGG ACGAGTTGGC GGCGGCGGTC CGACGGGTCG CCGAGGGCGA TGCCGTCTTC
AGCCCCCGGC TGGCCGGTTT CGTGTTGGAC GCCTTCGCCG CCCGCCCGGA CGCGCCGGTC
TCCGACCCCG AGCTGGACCA GCTGACCAAC CGGGAACGGG AGGTGTTGCG TCTGCTCGCT
CGGGGGTACG CGTACAAGGA GATCGCCAAG GAGCTGTACA TCTCGATCAA GACGGTCGAG
ACGCACGTGT CGAACGTGCT CCGCAAGCTC CAGATGTCCA GCCGCTACGA GTTGTCACGC
TGGGCGGCGG ATCGTCGGCT TGTCTGA
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| Protein sequence | MTDQTAGAAA DAGAATRRLR VFLVDDHAMF RAGVRAELGA HVDVVGEAST VGEAVSRIAA
TEPDVVLLDV HMPEGGGRAV LEAIRRTYPH VRFLALSVSD AAEDVIGLIR AGARGYVTKT
ISPDELAAAV RRVAEGDAVF SPRLAGFVLD AFAARPDAPV SDPELDQLTN REREVLRLLA
RGYAYKEIAK ELYISIKTVE THVSNVLRKL QMSSRYELSR WAADRRLV
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