Gene Tpau_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0354 
Symbol 
ID9154489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp370522 
End bp371190 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003645336 
Protein GI296138093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAACTG TGGGTACCTC GGAACTAGAC GATGCGGCGA TCCGTGTACT GGTGGTCGAC 
GATCACCCGA TGTGGCGCGA CGCCGTGGCC CGCGACCTGG AGGCACGTGG CTTCACCGTG 
GCGGGTACGG CCGATTCGGT GGCGGCCGCC GGCCGGATCG CGGGCGCAGT GCAGCCGACC 
GTGGTGCTGA TGGACATGTC GCTGCCCGAT GGTGACGGTG CCGCCGGGAC CACACTGGTG 
CTCCAGCACG CACCGCAGGC CGCGGTGCTA ATCCTCTCGG CTTCGGACGA ACGCGAGGAC 
GTGGTCGAGG CCGTGAAGGC CGGAGCCTGC GGCTATCTGG TCAAGAGTGC TTCGGCCGAG 
GAATTGGTGG CGGCGGTCCG CGCCACCGCG GCGCACCAGC CGGTGTTCAC CCCCGGTCTG 
GCCGGACTGG TGCTCGGTGA ATTCCGGCGC ATGGCCGCCG AACCCGAGCC GGCCGGCCCG 
CAGCTCACTC CCCGCGAGAC CGAGGTGCTG CGGCTGGTGG CGAAAGGCTT GTCCGCCAAG 
CAGATCGCCA CCCGATTGCA TCTGAGTCAC CGTACTGTCG AGAACCACGT GCAGGCGACG 
CTGCGCAAGC TCCAACTCGG GAACCGAGTG GAGCTCGCGC GGTACGCCTT GGAGAACGGC 
CTGGACTAG
 
Protein sequence
MGTVGTSELD DAAIRVLVVD DHPMWRDAVA RDLEARGFTV AGTADSVAAA GRIAGAVQPT 
VVLMDMSLPD GDGAAGTTLV LQHAPQAAVL ILSASDERED VVEAVKAGAC GYLVKSASAE 
ELVAAVRATA AHQPVFTPGL AGLVLGEFRR MAAEPEPAGP QLTPRETEVL RLVAKGLSAK 
QIATRLHLSH RTVENHVQAT LRKLQLGNRV ELARYALENG LD