Gene Tfu_2950 details

Gene Information

• Locus tag: Tfu_2950
• ID: 3580349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3460989
• End bp: 3461654
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637686681
• Product: LuxR response regulator receiver
• Protein accession: YP_291006
• Protein GI: 72163349
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCAGG CGGACACGCC TAAGCCGATC AGGGTGTTTC TGGTCGACGA TCACGAGGTG 
GTGCGCCGGG GAGTTGCCTC GCTTCTCGAA GACGAGGACG ACCTGGAGGT TGTCGGCGAG 
GCGAGCACCG CGGAGCAAGC GCTCAGCCGC ATCCCGGTGG TGAAACCGGA TGTAGCGATT 
CTTGACGTGC GACTGCCTGA CGGTTCCGGG GTTGAAGTGT GCCGGGAGAT CCGGTCATCC 
CACCCTGACA TCGCCTGCCT GATGCTCACT TCTTTCGCCG ATGACGACGC GCTCTTCAAG 
GCGGTGATGG CGGGCGCGGC CGGCTACGTG CTCAAGCAGA TCCACGGCTC TGATCTGGTG 
GGGGCGGTGC GTACCGTGGC GTCGGGTGGT TCGCTGCTTG ACCCGCGCAG CACGGGGCGG 
ATGTTGGAGC GGCTGCGGCA GAACGGCGGT AAACCCGATC CGCTGGCGGC ACTCACCCCG 
CAGGAGCGGC AGATCCTCGA TCTGATCGGG GAAGGGCTCA CCAACCGGCA AATCGGGGAG 
CGGCTCTTCT TGGCAGAGAA GACCGTGAAG AACTACGTTT CTAGCCTGTT GGGGAAGCTT 
GACCTGAAGC GCCGCACCCA GGCTGCGGTG CTGGTCGCGC AGTTGCGCGC GAAGAACCAG 
ATCTGA 

 

Protein sequence

MPQADTPKPI RVFLVDDHEV VRRGVASLLE DEDDLEVVGE ASTAEQALSR IPVVKPDVAI 
LDVRLPDGSG VEVCREIRSS HPDIACLMLT SFADDDALFK AVMAGAAGYV LKQIHGSDLV 
GAVRTVASGG SLLDPRSTGR MLERLRQNGG KPDPLAALTP QERQILDLIG EGLTNRQIGE 
RLFLAEKTVK NYVSSLLGKL DLKRRTQAAV LVAQLRAKNQ I