More than 300 homologs were found in PanDaTox collection
for query gene Sked_28320 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 		 220 aa  427  1e-119  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  82.55 
 
 		 226 aa  319  1.9999999999999998e-86  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  79.05 
 
 		 218 aa  310  1e-83  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  79.62 
 
 		 217 aa  305  3e-82  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  78.67 
 
 		 226 aa  303  2.0000000000000002e-81  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  76.85 
 
 		 228 aa  301  5.000000000000001e-81  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  78.2 
 
 		 232 aa  300  1e-80  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  70.09 
 
 		 210 aa  280  2e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  68.72 
 
 		 212 aa  278  5e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  69.67 
 
 		 233 aa  274  9e-73  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  68.72 
 
 		 223 aa  272  2.0000000000000002e-72  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  66.82 
 
 		 212 aa  270  1e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  64.89 
 
 		 226 aa  264  8e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  67.14 
 
 		 228 aa  263  1e-69  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  66.19 
 
 		 228 aa  260  8.999999999999999e-69  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  63.89 
 
 		 229 aa  257  8e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  69.64 
 
 		 228 aa  255  4e-67  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  66.2 
 
 		 218 aa  254  6e-67  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  64.79 
 
 		 216 aa  253  1.0000000000000001e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  61.29 
 
 		 219 aa  250  2e-65  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  68.66 
 
 		 229 aa  248  4e-65  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  67.14 
 
 		 227 aa  246  1e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  63.93 
 
 		 231 aa  246  2e-64  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  64.63 
 
 		 232 aa  245  4e-64  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  61.43 
 
 		 217 aa  244  8e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  60 
 
 		 228 aa  244  8e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  63.08 
 
 		 231 aa  237  1e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  62.33 
 
 		 223 aa  237  1e-61  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  60.19 
 
 		 223 aa  220  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  45.71 
 
 		 219 aa  155  5.0000000000000005e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  40.37 
 
 		 211 aa  142  3e-33  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  37.77 
 
 		 242 aa  138  7.999999999999999e-32  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  37.78 
 
 		 237 aa  137  1e-31  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.87 
 
 		 216 aa  137  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  42.72 
 
 		 222 aa  137  2e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  38.46 
 
 		 231 aa  136  3.0000000000000003e-31  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  39.34 
 
 		 218 aa  135  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.28 
 
 		 253 aa  134  9.999999999999999e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  37.33 
 
 		 237 aa  134  9.999999999999999e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  37.67 
 
 		 236 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  37.21 
 
 		 234 aa  133  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.99 
 
 		 303 aa  133  1.9999999999999998e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  39.52 
 
 		 250 aa  132  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  41.67 
 
 		 216 aa  130  1.0000000000000001e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  37.95 
 
 		 223 aa  130  2.0000000000000002e-29  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  37.27 
 
 		 243 aa  129  3e-29  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  39.73 
 
 		 223 aa  129  3e-29  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  42.18 
 
 		 216 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  39.73 
 
 		 223 aa  129  3e-29  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  38.14 
 
 		 234 aa  129  3e-29  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  41.12 
 
 		 217 aa  129  5.0000000000000004e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.02 
 
 		 217 aa  128  7.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.85 
 
 		 238 aa  128  8.000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  40.74 
 
 		 217 aa  127  9.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  42.93 
 
 		 227 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.05 
 
 		 217 aa  125  3e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.05 
 
 		 217 aa  125  3e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  36.19 
 
 		 241 aa  125  4.0000000000000003e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  44.55 
 
 		 223 aa  125  4.0000000000000003e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  38.31 
 
 		 213 aa  124  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  41.98 
 
 		 225 aa  124  9e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  38.07 
 
 		 214 aa  124  1e-27  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  39.11 
 
 		 218 aa  124  2e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  36.23 
 
 		 213 aa  123  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  33.8 
 
 		 213 aa  123  2e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  39.81 
 
 		 207 aa  123  2e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  39.71 
 
 		 215 aa  122  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  35.78 
 
 		 213 aa  122  3e-27  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  38.39 
 
 		 220 aa  122  3e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.55 
 
 		 213 aa  122  4e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  40.2 
 
 		 234 aa  122  5e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  34.91 
 
 		 217 aa  122  6e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.09 
 
 		 222 aa  121  8e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  37.5 
 
 		 214 aa  121  9e-27  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  35.65 
 
 		 213 aa  121  9e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  32.56 
 
 		 218 aa  121  9.999999999999999e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  35.27 
 
 		 221 aa  121  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  36.21 
 
 		 236 aa  121  9.999999999999999e-27  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  33.33 
 
 		 223 aa  120  1.9999999999999998e-26  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  40.1 
 
 		 226 aa  119  3.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40 
 
 		 219 aa  119  4.9999999999999996e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  37.62 
 
 		 218 aa  118  7.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  32.86 
 
 		 214 aa  118  7.999999999999999e-26  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  38.14 
 
 		 230 aa  118  7.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  35.1 
 
 		 218 aa  117  9.999999999999999e-26  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.02 
 
 		 212 aa  117  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  38.35 
 
 		 221 aa  117  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  37.32 
 
 		 203 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  38.57 
 
 		 221 aa  117  9.999999999999999e-26  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  36.67 
 
 		 209 aa  117  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  37.44 
 
 		 236 aa  117  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  35.1 
 
 		 218 aa  117  9.999999999999999e-26  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  36.84 
 
 		 215 aa  116  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  40.1 
 
 		 226 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_008781  Pnap_3764  two component LuxR family transcriptional regulator  36.4 
 
 		 232 aa  117  1.9999999999999998e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  33.94 
 
 		 225 aa  116  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  32.7 
 
 		 215 aa  116  1.9999999999999998e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  38.35 
 
 		 218 aa  116  3e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  31.75 
 
 		 215 aa  115  3.9999999999999997e-25  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  34.16 
 
 		 219 aa  115  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
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