| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4344 |
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| Symbol | |
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| ID | 5319214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 841192 |
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| End bp | 841851 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776149 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001313082 |
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| Protein GI | 150376486 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.218307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGG GAATCCGAGT AGCCGTGATC GATGATCACC CCTTGTTCAG GGAGGGCGTG
AGCCGTAGCC TGTCAGAAAT CGACGGGTTT GAGATCGTCG CGGAAGGCGG CTCGCGGGAC
GAAGCGATCG CCATCGCGCG CAGCCACAAT CCCGACGTCA TGCTAATCGA CATCTCCATG
CCCGGCGGCG GCCTGAACGC CATTCCGGCA ATTCTGACCG TCGCGCCTTC GCAGAAAATT
GTGATGCTTA CCGTTTCCGA GGCGAATGAC GACGTCGCGG CAGCTCTCAA GGAAGGAGCG
AAGGGGTATA TCCTCAAGGG GATCGGCGCC AGGGCGCTAG CCGACGTCAT CCGCACCGTC
GCTTCGGGAG AGAGCTATGT CGCGCCCACG CTTTCCGCCA AGCTGCTGAC CGGGCAGTTG
CTCAATCCTG CACCGGCCAA GTCCAACCTC GTCGCGGAGC TGACGCGCCG CGAACAGGAG
GTCCTGCATC TCGTCGCGTC CGGCATGAGC AACAAGCAGA TCGCCCGCAA GCTCGATCTG
CACGAGAAAA CGGTGAAGCA TCACATGACG CAGATCATGG CGAAGCTCAA CGTCGCCAAC
CGGACAGAGG CGGCCATGGT GCTGCGCGAT GCAGTCGACT GGCGTCCGGT CAGTCAATGA
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| Protein sequence | MMMGIRVAVI DDHPLFREGV SRSLSEIDGF EIVAEGGSRD EAIAIARSHN PDVMLIDISM
PGGGLNAIPA ILTVAPSQKI VMLTVSEAND DVAAALKEGA KGYILKGIGA RALADVIRTV
ASGESYVAPT LSAKLLTGQL LNPAPAKSNL VAELTRREQE VLHLVASGMS NKQIARKLDL
HEKTVKHHMT QIMAKLNVAN RTEAAMVLRD AVDWRPVSQ
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