| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3579 |
|---|
| Symbol | |
|---|
| ID | 4974897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3816969 |
|---|
| End bp | 3817622 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640457805 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001134841 |
|---|
| Protein GI | 145224163 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.393396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0540104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTG ACCGTACCTC GGTGATGGTC GTCGACGATC ACCCCATCTG GCGCGACGCG
GTGGCCCGTG ATCTCGCCGA CGACGGCTTC GACGTGGTCG CCACCGCTGA CGGCGTGGCC
TCGGCGAAGC GCCGCGCTGC GGTGGTGCGG CCCGACGTGG TGGTGATGGA CATGCGGTTG
GGCGACGGCG ACGGCGCCCA GGCGACCACG GAGGTGCTGG CGGTGTCGCC GTCGTCGCGG
ATCCTGGTGC TCTCGGCATC CGACGAGCGC GACGACGTGC TGGAAGCGGT GAAGGCGGGT
GCCACCGGCT ACCTGGTCAA GAGCGCGTCG AAACAGGAGC TCGGTGACGC GGTGCGCGCC
ACCGCCCAGG GTCGCGCGGT CTTCACTCCC GGGCTGGCAG GCCTGGTGCT GGGGGAGTTC
CGCCGCATCG AGCAGAGCTC GCCTGCGGGT GCGGACGGGC CCACCCTGAC CGAGCGCGAG
ACCGAGATCC TGCGCTACGT CGCAAAGGGG TTGACCGCCA AGCAGATTGC CTCGCGGCTG
TCGTTGAGCC ACCGCACGGT CGAGAACCAT GTGCAGGCGA CGTTCCGCAA ACTGCAGGTG
GGTAACCGTG TCGAGTTGGC CCGCTACGCG ATCGAACACG GACTGGACGA GTAG
|
|---|
| Protein sequence | MGIDRTSVMV VDDHPIWRDA VARDLADDGF DVVATADGVA SAKRRAAVVR PDVVVMDMRL
GDGDGAQATT EVLAVSPSSR ILVLSASDER DDVLEAVKAG ATGYLVKSAS KQELGDAVRA
TAQGRAVFTP GLAGLVLGEF RRIEQSSPAG ADGPTLTERE TEILRYVAKG LTAKQIASRL
SLSHRTVENH VQATFRKLQV GNRVELARYA IEHGLDE
|
|---|
| |