Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2582 |
Symbol | |
ID | 3581054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3048328 |
End bp | 3049029 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637686301 |
Product | LuxR response regulator receiver |
Protein accession | YP_290638 |
Protein GI | 72162981 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGGGAT GGTACAGCCA GGTAGAGTCC CACGATGTGG GAGAAGAGAA CACCTTCGCC AGTGGCCGTA TCCCGAGGAT CGTCATCGTC GACGACCACC ACCTGTTCCG CAGTGGAGTG CGGGGCGAAC TCGGCGACAC CGTCGACGTA GTCGGCGAAG CCGGAGACGT CGACGAGGCG GTCCGCGTCA TCAGCGAACA GCGTCCCGAC CTGGTCCTGC TCGACGTCCA CCTGCCCGGC GGCGGAGGAA TCGAGGTGCT CCGCCGGATC CTGCCGAAAC ACCCTGAGAT CCGGTTCCTC GCCCTGTCGG TCTCCGACGC TGCCGAGGAC GTCATCGGAG TGATCCGCGC CGGCGCCCGC GGCTACGTCA CGAAAACCAT CTCCGGCACG GAGCTCGCCG ACGCGATTGT GCGGGTGGCC GACGGTGACG CCGTGTTCTC CCCACGTCTC GCGGGATTCG TCCTCGACGC GTTCGCGGCC ACCGACGCAC CCCCCGTCGA CCCGGAACTC GACCGCCTCA CCCAGCGGGA ACGCGAAGTG CTCCGGTTGA TCGCCCGCGG CTACGCCTAC AAGGAGGTCG CCCGCGAACT GTTCATCTCG GTGAAGACCG TGGAGACCCA CGTCTCCTCG GTCTTGCGCA AACTCCAGTT GTCCAACCGG CACGAACTGA GCCGCTGGGC TACGGCCCGC AAACTCGTCT AA
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Protein sequence | MRGWYSQVES HDVGEENTFA SGRIPRIVIV DDHHLFRSGV RGELGDTVDV VGEAGDVDEA VRVISEQRPD LVLLDVHLPG GGGIEVLRRI LPKHPEIRFL ALSVSDAAED VIGVIRAGAR GYVTKTISGT ELADAIVRVA DGDAVFSPRL AGFVLDAFAA TDAPPVDPEL DRLTQREREV LRLIARGYAY KEVARELFIS VKTVETHVSS VLRKLQLSNR HELSRWATAR KLV
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