Gene Tfu_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2582 
Symbol 
ID3581054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3048328 
End bp3049029 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637686301 
ProductLuxR response regulator receiver 
Protein accessionYP_290638 
Protein GI72162981 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGGGAT GGTACAGCCA GGTAGAGTCC CACGATGTGG GAGAAGAGAA CACCTTCGCC 
AGTGGCCGTA TCCCGAGGAT CGTCATCGTC GACGACCACC ACCTGTTCCG CAGTGGAGTG
CGGGGCGAAC TCGGCGACAC CGTCGACGTA GTCGGCGAAG CCGGAGACGT CGACGAGGCG
GTCCGCGTCA TCAGCGAACA GCGTCCCGAC CTGGTCCTGC TCGACGTCCA CCTGCCCGGC
GGCGGAGGAA TCGAGGTGCT CCGCCGGATC CTGCCGAAAC ACCCTGAGAT CCGGTTCCTC
GCCCTGTCGG TCTCCGACGC TGCCGAGGAC GTCATCGGAG TGATCCGCGC CGGCGCCCGC
GGCTACGTCA CGAAAACCAT CTCCGGCACG GAGCTCGCCG ACGCGATTGT GCGGGTGGCC
GACGGTGACG CCGTGTTCTC CCCACGTCTC GCGGGATTCG TCCTCGACGC GTTCGCGGCC
ACCGACGCAC CCCCCGTCGA CCCGGAACTC GACCGCCTCA CCCAGCGGGA ACGCGAAGTG
CTCCGGTTGA TCGCCCGCGG CTACGCCTAC AAGGAGGTCG CCCGCGAACT GTTCATCTCG
GTGAAGACCG TGGAGACCCA CGTCTCCTCG GTCTTGCGCA AACTCCAGTT GTCCAACCGG
CACGAACTGA GCCGCTGGGC TACGGCCCGC AAACTCGTCT AA
 
Protein sequence
MRGWYSQVES HDVGEENTFA SGRIPRIVIV DDHHLFRSGV RGELGDTVDV VGEAGDVDEA 
VRVISEQRPD LVLLDVHLPG GGGIEVLRRI LPKHPEIRFL ALSVSDAAED VIGVIRAGAR
GYVTKTISGT ELADAIVRVA DGDAVFSPRL AGFVLDAFAA TDAPPVDPEL DRLTQREREV
LRLIARGYAY KEVARELFIS VKTVETHVSS VLRKLQLSNR HELSRWATAR KLV