| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1106 |
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| Symbol | |
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| ID | 5746661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1225773 |
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| End bp | 1226444 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296186 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001562136 |
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| Protein GI | 160896554 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.584765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTTCT CCAGCCCCAT CTCCGTCTTC GTCATCGACG ACCACACGCT GTTCCGCCGC
GGCCTGATCG CCCTCATCGC CCAGGACGCA GGCCTGCGCG TGGTCGGCGA GGCCGGCGAC
GCGGGCGAGG CCCTGCGCCT GGTGCCCGCG CTGGCGCCCC AGGTCATCCT GTTGGACAAC
CACCTGCCCG GCGTGCTGGG CGTCGATGCC ATCGCGGGCC TGCGCGCGGC CTCGCCCGGC
AGCCGCGTCG TGATGCTCAC CGTGAGCGAG GACGGCCAGG ACCTGGCGGC CGCGCTGCGC
AACGGCGCCC AGGGCTATCT GCTCAAGACC ATCGACGGCG ACCTGCTGTC CGAAGCCCTG
CGCCGCGCCG CGCGCGGCGA GCCCGTGGTC AGCCCCGAGA TGATGGGCAA GCTGGTGGCG
GCCTTCCAGT CCCAGGGCGC GCCCGAGCCC CAGGCGCCCG AGCCGGACGA GGCCCCGGCC
TCGCCGCTGT CCCCGCGCGA GGAAGAGGTG CTGGTCCAGA TCGCCCGGGG CGCCAGCAAC
AAGGAAATCG CCCGCACGCT GGACATTGCC GAGACCACGG TCAAGATCCA TGTGCAACAC
ATCCTGCGCA AGCTGGGCCT GAGCTCGCGC GTGCAGGCGG CGGTGTATGC GTCGGAGCGG
CAGCGGGATT GA
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| Protein sequence | MSFSSPISVF VIDDHTLFRR GLIALIAQDA GLRVVGEAGD AGEALRLVPA LAPQVILLDN
HLPGVLGVDA IAGLRAASPG SRVVMLTVSE DGQDLAAALR NGAQGYLLKT IDGDLLSEAL
RRAARGEPVV SPEMMGKLVA AFQSQGAPEP QAPEPDEAPA SPLSPREEEV LVQIARGASN
KEIARTLDIA ETTVKIHVQH ILRKLGLSSR VQAAVYASER QRD
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