Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3606 |
Symbol | |
ID | 4599409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3823558 |
End bp | 3824247 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778214 |
Product | regulatory protein, LuxR |
Protein accession | YP_924793 |
Protein GI | 119717828 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.527821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGC AGCACCCGGC GTCCCGCGCC GGGGGACCGG CGGCGATCGT GATCGTCGAC GACCACGCCA TGTTCCGGCG CGGAGTGCGC GCCGAGCTCG AGAGCGCCGG CCGCGGGCTG GTCCGGGTGC TCGCCGAGGC CGCCGACGTG GACGAGGCGG TGGCGGCGGT CTCGACCCAC CGCCCCGACG TGGTGCTGCT CGACGTCCAC CTGCCCGGGG GCGGTGGGGC CGAGGTGATG CGCAGGGTGA CGGCCTCGCA CGCCTCCCCG GACACCCGCT ACCTCGCCCT GTCGGTCAGC GATGCCGCCG AGGACGTCAT CGGGACCATC CGCGGCGGGG CGCGCGGCTA CGTCACCAAG ACCATCACCG GTCCCGAGCT GGTCCAGGCG ATCGGCCGGG TCGCCGAGGG CGACGCCGTC TTCTCGCCCC GGCTGGCCGG CTTCGTCCTG GACGCGTTCT CCGGCTCGAT CGACGTCGCC GCGGTGGACG AGGACCTCGA CCGGCTCACC GAGCGCGAGC GGGAGGTGAT GCGCCTGATC GCCCGCGGCT ACGCCTACAA GGAGGTCGCG AAGGAGCTGT TCATCTCGAT CAAGACCGTC GAGACCCACA TGTCCAGCGT GCTGCGCAAG CTCCAGCTCT CCTCGCGCCA CGAGCTCACC CGCTGGGCCT CCGACCGCCG GCTGCTCTAG
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Protein sequence | MSEQHPASRA GGPAAIVIVD DHAMFRRGVR AELESAGRGL VRVLAEAADV DEAVAAVSTH RPDVVLLDVH LPGGGGAEVM RRVTASHASP DTRYLALSVS DAAEDVIGTI RGGARGYVTK TITGPELVQA IGRVAEGDAV FSPRLAGFVL DAFSGSIDVA AVDEDLDRLT EREREVMRLI ARGYAYKEVA KELFISIKTV ETHMSSVLRK LQLSSRHELT RWASDRRLL
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