More than 300 homologs were found in PanDaTox collection
for query gene Noca_3606 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_3606  regulatory protein, LuxR  100 
 
 
229 aa  448  1e-125  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  71.96 
 
 
210 aa  298  5e-80  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  71.96 
 
 
233 aa  293  1e-78  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  72.43 
 
 
223 aa  293  1e-78  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  71.96 
 
 
212 aa  293  2e-78  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  69.63 
 
 
212 aa  285  5e-76  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  65.8 
 
 
229 aa  276  2e-73  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  66.82 
 
 
217 aa  276  3e-73  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  68.37 
 
 
216 aa  275  5e-73  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  65.78 
 
 
226 aa  270  1e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  65.42 
 
 
228 aa  269  2.9999999999999997e-71  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  65.89 
 
 
228 aa  269  2.9999999999999997e-71  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  68.42 
 
 
232 aa  264  8.999999999999999e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  63.3 
 
 
219 aa  263  2e-69  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  65.44 
 
 
226 aa  259  3e-68  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  65.3 
 
 
218 aa  258  8e-68  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.214241 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  63.4 
 
 
228 aa  256  3e-67  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  64.47 
 
 
226 aa  253  2.0000000000000002e-66  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  62.79 
 
 
231 aa  251  7e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  66.52 
 
 
217 aa  249  2e-65  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  61.82 
 
 
218 aa  249  2e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  61.09 
 
 
223 aa  246  3e-64  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  63.47 
 
 
227 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  68.66 
 
 
220 aa  241  7.999999999999999e-63  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  66.08 
 
 
228 aa  240  1e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  61.3 
 
 
232 aa  237  1e-61  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  57.02 
 
 
228 aa  230  1e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  59.03 
 
 
231 aa  228  6e-59  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  57.4 
 
 
223 aa  222  4e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  42.92 
 
 
217 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  42.72 
 
 
216 aa  148  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.06 
 
 
216 aa  147  1.0000000000000001e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.67 
 
 
234 aa  145  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  37.61 
 
 
243 aa  141  9e-33  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.5 
 
 
253 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  40.27 
 
 
223 aa  139  3.9999999999999997e-32  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  37.56 
 
 
237 aa  139  4.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  37.39 
 
 
237 aa  139  4.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  40 
 
 
218 aa  138  4.999999999999999e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.83 
 
 
234 aa  138  6e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  42.65 
 
 
219 aa  138  6e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  37.22 
 
 
231 aa  138  6e-32  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  40.28 
 
 
216 aa  138  6e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  37.32 
 
 
231 aa  138  7.999999999999999e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  39.82 
 
 
223 aa  138  8.999999999999999e-32  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  39.82 
 
 
223 aa  138  8.999999999999999e-32  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  37.9 
 
 
303 aa  137  1e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.23 
 
 
219 aa  137  2e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  35.68 
 
 
217 aa  136  3.0000000000000003e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  41.4 
 
 
223 aa  136  3.0000000000000003e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  37.84 
 
 
236 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  38.07 
 
 
242 aa  134  8e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  34.45 
 
 
1648 aa  134  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  38.25 
 
 
226 aa  134  9e-31  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  35.02 
 
 
218 aa  132  3e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  39.8 
 
 
218 aa  132  3.9999999999999996e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  37.5 
 
 
213 aa  132  3.9999999999999996e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  38.53 
 
 
213 aa  132  3.9999999999999996e-30  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  35.94 
 
 
211 aa  132  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  39.23 
 
 
217 aa  131  7.999999999999999e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  37.75 
 
 
222 aa  131  9e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  41.71 
 
 
220 aa  131  9e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  38.92 
 
 
213 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  34.47 
 
 
228 aa  130  1.0000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.19 
 
 
217 aa  130  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.19 
 
 
217 aa  130  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  38.03 
 
 
215 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  37.98 
 
 
227 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  39.9 
 
 
213 aa  130  2.0000000000000002e-29  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.02 
 
 
222 aa  130  2.0000000000000002e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.25 
 
 
220 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  33.65 
 
 
221 aa  129  4.0000000000000003e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  38.92 
 
 
220 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  38.32 
 
 
230 aa  129  5.0000000000000004e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.45 
 
 
223 aa  129  6e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  39.25 
 
 
218 aa  128  6e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  35.98 
 
 
220 aa  128  7.000000000000001e-29  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  35.05 
 
 
214 aa  128  8.000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  35.98 
 
 
222 aa  127  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  33.64 
 
 
218 aa  127  1.0000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  38.64 
 
 
212 aa  127  1.0000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.1 
 
 
224 aa  126  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.35 
 
 
212 aa  127  2.0000000000000002e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  37.79 
 
 
215 aa  127  2.0000000000000002e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.76 
 
 
241 aa  126  2.0000000000000002e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  36.67 
 
 
218 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  36.67 
 
 
218 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  39.63 
 
 
225 aa  125  4.0000000000000003e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  36.19 
 
 
217 aa  125  4.0000000000000003e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.332036 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  30.7 
 
 
215 aa  125  4.0000000000000003e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  41.01 
 
 
222 aa  126  4.0000000000000003e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  37.55 
 
 
256 aa  125  4.0000000000000003e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.9 
 
 
250 aa  125  5e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  38.68 
 
 
236 aa  125  5e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  36.74 
 
 
221 aa  125  6e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  41.55 
 
 
223 aa  125  6e-28  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  40.76 
 
 
222 aa  125  6e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  38.86 
 
 
225 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  35.71 
 
 
219 aa  125  6e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  31.28 
 
 
219 aa  125  6e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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