More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0915 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  100 
 
 		 223 aa  439  9.999999999999999e-123  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  85.71 
 
 		 231 aa  355  2.9999999999999997e-97  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  70.72 
 
 		 216 aa  281  4.0000000000000003e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  67.89 
 
 		 217 aa  278  5e-74  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  68.18 
 
 		 212 aa  275  6e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  68.49 
 
 		 219 aa  274  8e-73  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  68.81 
 
 		 228 aa  273  1.0000000000000001e-72  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  69.27 
 
 		 229 aa  273  1.0000000000000001e-72  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  68.81 
 
 		 228 aa  272  3e-72  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  68 
 
 		 218 aa  270  1e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  68.18 
 
 		 212 aa  269  2e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  65.61 
 
 		 210 aa  266  2.9999999999999995e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  66.51 
 
 		 233 aa  264  7e-70  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  66.06 
 
 		 223 aa  258  4e-68  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  63.32 
 
 		 226 aa  251  5.000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  61.93 
 
 		 226 aa  246  2e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  60.55 
 
 		 228 aa  238  6.999999999999999e-62  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  58.95 
 
 		 228 aa  233  2.0000000000000002e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  64.38 
 
 		 227 aa  232  3e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  61.09 
 
 		 229 aa  231  7.000000000000001e-60  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.33 
 
 		 220 aa  224  7e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  60.45 
 
 		 232 aa  223  2e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  58.26 
 
 		 218 aa  220  9.999999999999999e-57  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  58.11 
 
 		 223 aa  220  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  59.55 
 
 		 226 aa  218  5e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  58.33 
 
 		 232 aa  218  6e-56  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  60.61 
 
 		 228 aa  218  6e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  60.45 
 
 		 217 aa  217  1e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  51.97 
 
 		 231 aa  204  7e-52  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  43.64 
 
 		 218 aa  154  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  40.45 
 
 		 237 aa  152  4e-36  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  41.33 
 
 		 242 aa  150  1e-35  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  40 
 
 		 237 aa  149  4e-35  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  41.55 
 
 		 213 aa  147  8e-35  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  42.79 
 
 		 236 aa  145  3e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  39.37 
 
 		 253 aa  145  6e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  41.31 
 
 		 213 aa  145  6e-34  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.86 
 
 		 221 aa  144  1e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  43.12 
 
 		 216 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  37.61 
 
 		 231 aa  142  3e-33  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  44.19 
 
 		 216 aa  142  4e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  36.32 
 
 		 217 aa  142  5e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  38.64 
 
 		 219 aa  142  5e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  39.91 
 
 		 303 aa  142  5e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.27 
 
 		 234 aa  140  9.999999999999999e-33  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.13 
 
 		 216 aa  139  1.9999999999999998e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  42.86 
 
 		 223 aa  140  1.9999999999999998e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  37.09 
 
 		 221 aa  140  1.9999999999999998e-32  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  40.38 
 
 		 234 aa  139  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.94 
 
 		 221 aa  139  4.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  39.82 
 
 		 223 aa  139  4.999999999999999e-32  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  44.91 
 
 		 222 aa  138  6e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  37.5 
 
 		 218 aa  138  6e-32  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  37.5 
 
 		 218 aa  138  6e-32  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.55 
 
 		 238 aa  138  7e-32  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  37.85 
 
 		 212 aa  136  2e-31  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.2 
 
 		 217 aa  136  3.0000000000000003e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.17 
 
 		 217 aa  135  4e-31  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  39.01 
 
 		 250 aa  135  6.0000000000000005e-31  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  39.42 
 
 		 226 aa  134  9e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  38.67 
 
 		 243 aa  134  9e-31  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  37.16 
 
 		 218 aa  134  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  38.81 
 
 		 223 aa  133  1.9999999999999998e-30  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  38.81 
 
 		 223 aa  133  1.9999999999999998e-30  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  38.81 
 
 		 233 aa  133  1.9999999999999998e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  36.53 
 
 		 211 aa  133  1.9999999999999998e-30  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  37.79 
 
 		 220 aa  132  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  36.62 
 
 		 215 aa  133  3e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  39.07 
 
 		 213 aa  132  3.9999999999999996e-30  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.78 
 
 		 212 aa  132  3.9999999999999996e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  43.19 
 
 		 219 aa  132  5e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  43.54 
 
 		 219 aa  132  5e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  38.71 
 
 		 241 aa  132  5e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  42 
 
 		 216 aa  131  6.999999999999999e-30  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  40.19 
 
 		 221 aa  131  9e-30  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  36.24 
 
 		 210 aa  131  9e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  38.89 
 
 		 213 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  37.61 
 
 		 210 aa  131  1.0000000000000001e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.64 
 
 		 216 aa  130  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  41.31 
 
 		 227 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  35.65 
 
 		 215 aa  131  1.0000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  36.7 
 
 		 210 aa  130  1.0000000000000001e-29  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  41.67 
 
 		 221 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  40 
 
 		 230 aa  130  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  39.61 
 
 		 224 aa  130  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  40.93 
 
 		 231 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  41.83 
 
 		 217 aa  130  2.0000000000000002e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  42.93 
 
 		 213 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  40.27 
 
 		 209 aa  130  2.0000000000000002e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  40.19 
 
 		 223 aa  130  2.0000000000000002e-29  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  33.49 
 
 		 219 aa  130  2.0000000000000002e-29  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  42.01 
 
 		 222 aa  130  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  40.54 
 
 		 220 aa  129  3e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  40.83 
 
 		 249 aa  129  3e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  44.5 
 
 		 218 aa  129  3e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.2 
 
 		 226 aa  129  3e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.65 
 
 		 216 aa  129  4.0000000000000003e-29  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  35.65 
 
 		 216 aa  129  4.0000000000000003e-29  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  42.65 
 
 		 225 aa  129  4.0000000000000003e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  39.61 
 
 		 244 aa  129  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
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