| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1487 |
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| Symbol | |
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| ID | 3903124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1779390 |
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| End bp | 1780085 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878824 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_480592 |
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| Protein GI | 86740192 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0122618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.753042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGACG AACTGGCGGA CGGTTCCGGA GTCGGTGACG CACCGGGGCC TGCGTCGATC
ACCGGAACCA TCCGGGTGTT CCTTCTCGAC GACCACGAGG TGGTGCGTCG CGGGCTGCGG
GATCTCCTCA CCGACGAACC CGATGTGGAG GTGGTCGGGG AGGCCGGGCG GGCCGATGAG
GCGGTCGCCC GGATCCTGGC TCTCCAGCCC CACGTCGCGG TGCTGGACGC ACGCCTGGAG
GACGGCAGCG GTATCGAGGT CTGCCGGCAG GTCCGGTCGA GCGATCCACG GATCGCCTGC
CTCATCCTGA CCTCGTTCGA CGACGAGGAG GCGCTCTTCA CAGCGATCAT GGCGGGCGCG
GCCGGCTACG TTCTCAAGCA GATCCGGGGA ACCGCCCTCG TGGACGCGGT GCGCCAGGTG
GCGGCGGGCA AGTCTCTGCT CGATCCCGCG GTGACGCCCC GGGTCCTGGT GCGGCTGCGG
GAGGGACCGG CCGAGGACGA ACGGCTCTCC GGGCTCACCG ACCAGGAGCG GCGTATCCTC
CGGCTGATCG CGGAGGGGCT CACCAACCGC CAGATCGCCA GCCGGATGTT CCTCGCCGAG
AAGACCGTGA AGAACTACGT CTCCAGCATG CTGTCCAAGC TCGGGCTGGA GAGCCGGACC
CAGGCCGCGG TGTTCGCCAC CAGGCTGAAC CCCTGA
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| Protein sequence | MSDELADGSG VGDAPGPASI TGTIRVFLLD DHEVVRRGLR DLLTDEPDVE VVGEAGRADE
AVARILALQP HVAVLDARLE DGSGIEVCRQ VRSSDPRIAC LILTSFDDEE ALFTAIMAGA
AGYVLKQIRG TALVDAVRQV AAGKSLLDPA VTPRVLVRLR EGPAEDERLS GLTDQERRIL
RLIAEGLTNR QIASRMFLAE KTVKNYVSSM LSKLGLESRT QAAVFATRLN P
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