Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1487 |
Symbol | |
ID | 3903124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1779390 |
End bp | 1780085 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878824 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_480592 |
Protein GI | 86740192 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0122618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.753042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGACG AACTGGCGGA CGGTTCCGGA GTCGGTGACG CACCGGGGCC TGCGTCGATC ACCGGAACCA TCCGGGTGTT CCTTCTCGAC GACCACGAGG TGGTGCGTCG CGGGCTGCGG GATCTCCTCA CCGACGAACC CGATGTGGAG GTGGTCGGGG AGGCCGGGCG GGCCGATGAG GCGGTCGCCC GGATCCTGGC TCTCCAGCCC CACGTCGCGG TGCTGGACGC ACGCCTGGAG GACGGCAGCG GTATCGAGGT CTGCCGGCAG GTCCGGTCGA GCGATCCACG GATCGCCTGC CTCATCCTGA CCTCGTTCGA CGACGAGGAG GCGCTCTTCA CAGCGATCAT GGCGGGCGCG GCCGGCTACG TTCTCAAGCA GATCCGGGGA ACCGCCCTCG TGGACGCGGT GCGCCAGGTG GCGGCGGGCA AGTCTCTGCT CGATCCCGCG GTGACGCCCC GGGTCCTGGT GCGGCTGCGG GAGGGACCGG CCGAGGACGA ACGGCTCTCC GGGCTCACCG ACCAGGAGCG GCGTATCCTC CGGCTGATCG CGGAGGGGCT CACCAACCGC CAGATCGCCA GCCGGATGTT CCTCGCCGAG AAGACCGTGA AGAACTACGT CTCCAGCATG CTGTCCAAGC TCGGGCTGGA GAGCCGGACC CAGGCCGCGG TGTTCGCCAC CAGGCTGAAC CCCTGA
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Protein sequence | MSDELADGSG VGDAPGPASI TGTIRVFLLD DHEVVRRGLR DLLTDEPDVE VVGEAGRADE AVARILALQP HVAVLDARLE DGSGIEVCRQ VRSSDPRIAC LILTSFDDEE ALFTAIMAGA AGYVLKQIRG TALVDAVRQV AAGKSLLDPA VTPRVLVRLR EGPAEDERLS GLTDQERRIL RLIAEGLTNR QIASRMFLAE KTVKNYVSSM LSKLGLESRT QAAVFATRLN P
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