| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3253 |
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| Symbol | |
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| ID | 3904424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3852590 |
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| End bp | 3853231 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637880578 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_482339 |
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| Protein GI | 86741939 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TCCGGGTATT CATTCTCGAC GACCACGAAA TCGTGCGTAA CGGTCTACGG
CAGACCCTCG ATCGCCACGA CGACATCGAG GTGGTCGGCG AGGCCGGACT CGCCGCCGAG
GCGATCCGCA GAATCCCGGC GCTCCTGCCC AACGTGGCCG TCCTCGATGG CCGGCTCCCC
GACGGAAGCG GCATCGACGT GTGCCGCGAC ATCCGCTCCG CCCATCCAGA CGTCGCCTGC
CTCATTCTCA CGTCCTATGA CGACGACGAG GCCCTGTTCT CCGCCATCAT GGCCGGTGCC
GCCGGCTACG TCCTGAAGGA GATCCGCGGC AACGACCTGG TGAGCGCCAT CCGCACCGTG
GCCGCCGGCG GGTCGCTGCT CTCGCCATCG GTCACCCGCC GCGTCCTCGA CAGAATGCGC
CAAGGGCCCA GGGAAGACCC GACGCTGGCC TCCCTCAGCG CCCGGGAACG CGAAATCCTC
CAGCACATCG CCGAAGGTCT CACCAACCGG CAGATAGGTA CCCGGATACA CCTCTCCGAG
AAGACCGTGA AGAACTACGT CTCCAGCATC CTCGAAAAAC TCGGCATGAC CAGCCGGACC
CAGGCCGCCG TCTACGCCCT GAAGAAGACG AGTGAGGACT GA
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| Protein sequence | MKTIRVFILD DHEIVRNGLR QTLDRHDDIE VVGEAGLAAE AIRRIPALLP NVAVLDGRLP
DGSGIDVCRD IRSAHPDVAC LILTSYDDDE ALFSAIMAGA AGYVLKEIRG NDLVSAIRTV
AAGGSLLSPS VTRRVLDRMR QGPREDPTLA SLSAREREIL QHIAEGLTNR QIGTRIHLSE
KTVKNYVSSI LEKLGMTSRT QAAVYALKKT SED
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