More than 300 homologs were found in PanDaTox collection
for query gene Namu_4738 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  100 
 
 		 233 aa  462  1e-129  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  72.86 
 
 		 218 aa  315  4e-85  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  73.43 
 
 		 216 aa  301  6.000000000000001e-81  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  68.61 
 
 		 231 aa  298  5e-80  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  71.71 
 
 		 212 aa  297  1e-79  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  70.73 
 
 		 212 aa  294  9e-79  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  69.16 
 
 		 231 aa  292  3e-78  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  66.67 
 
 		 216 aa  274  9e-73  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  62.27 
 
 		 224 aa  274  1.0000000000000001e-72  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  66.67 
 
 		 244 aa  273  2.0000000000000002e-72  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  65.37 
 
 		 211 aa  271  4.0000000000000004e-72  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  69.19 
 
 		 214 aa  270  1e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  64.88 
 
 		 213 aa  270  2e-71  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  65.48 
 
 		 226 aa  263  2e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  64.65 
 
 		 213 aa  263  2e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  62.96 
 
 		 221 aa  261  6.999999999999999e-69  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  64.04 
 
 		 218 aa  261  1e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  62.32 
 
 		 216 aa  258  4e-68  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  65.71 
 
 		 225 aa  256  2e-67  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  60.19 
 
 		 254 aa  251  6e-66  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  64.71 
 
 		 223 aa  251  9.000000000000001e-66  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  60.68 
 
 		 219 aa  248  4e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  59.71 
 
 		 219 aa  247  9e-65  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  56.8 
 
 		 226 aa  246  2e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  59.91 
 
 		 223 aa  245  4e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  58.74 
 
 		 209 aa  240  1e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  57.94 
 
 		 239 aa  240  2e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  59.81 
 
 		 233 aa  238  5e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  62.14 
 
 		 218 aa  237  1e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  57.07 
 
 		 217 aa  237  1e-61  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  61.65 
 
 		 216 aa  237  2e-61  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  57.07 
 
 		 212 aa  236  3e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  56.94 
 
 		 228 aa  235  4e-61  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  56.94 
 
 		 228 aa  235  4e-61  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  56.94 
 
 		 228 aa  235  4e-61  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal  1 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  55.83 
 
 		 223 aa  233  2.0000000000000002e-60  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  57.28 
 
 		 216 aa  233  2.0000000000000002e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  55.5 
 
 		 215 aa  232  4.0000000000000004e-60  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal  1 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  55.5 
 
 		 215 aa  232  4.0000000000000004e-60  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.171113 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  55.5 
 
 		 220 aa  231  5e-60  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  58.17 
 
 		 214 aa  232  5e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  57.28 
 
 		 222 aa  228  7e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  59.35 
 
 		 216 aa  224  9e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal  1 
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  60 
 
 		 218 aa  216  2e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  58.05 
 
 		 218 aa  206  2e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  51.72 
 
 		 208 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_008541  Arth_3459  two component LuxR family transcriptional regulator  48.99 
 
 		 212 aa  186  2e-46  Arthrobacter sp. FB24  Bacteria  normal  0.775478  n/a   
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  50.24 
 
 		 207 aa  179  4e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.76 
 
 		 224 aa  178  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.0103975 
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  51.74 
 
 		 208 aa  176  2e-43  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.79 
 
 		 221 aa  172  3.9999999999999995e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  44.09 
 
 		 225 aa  171  6.999999999999999e-42  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_18340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.45 
 
 		 209 aa  165  5e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  41.83 
 
 		 222 aa  164  8e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  40.38 
 
 		 210 aa  164  2.0000000000000002e-39  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  40.38 
 
 		 210 aa  163  2.0000000000000002e-39  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  41.15 
 
 		 217 aa  162  3e-39  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_011886  Achl_1701  response regulator receiver protein  42.45 
 
 		 224 aa  162  4.0000000000000004e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0169479 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  43.66 
 
 		 225 aa  162  4.0000000000000004e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  43.52 
 
 		 241 aa  162  5.0000000000000005e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  40.38 
 
 		 210 aa  161  7e-39  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_006274  BCZK1321  response regulator  40.38 
 
 		 210 aa  161  7e-39  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  40.38 
 
 		 210 aa  161  7e-39  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  42.27 
 
 		 227 aa  161  8.000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  40 
 
 		 242 aa  160  1e-38  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  38.5 
 
 		 222 aa  160  1e-38  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  40.8 
 
 		 213 aa  160  1e-38  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  39.81 
 
 		 220 aa  160  1e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  39.9 
 
 		 210 aa  160  1e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  37.98 
 
 		 209 aa  160  2e-38  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  37.98 
 
 		 209 aa  160  2e-38  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  43.81 
 
 		 217 aa  159  3e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38.76 
 
 		 217 aa  159  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  45.5 
 
 		 220 aa  159  3e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  40.76 
 
 		 209 aa  159  4e-38  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  41.83 
 
 		 210 aa  159  5e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  40.67 
 
 		 220 aa  158  6e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  44.5 
 
 		 213 aa  157  1e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  39.82 
 
 		 234 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.26 
 
 		 219 aa  156  2e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  41.71 
 
 		 218 aa  156  3e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.27 
 
 		 226 aa  155  4e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  38.1 
 
 		 219 aa  155  7e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  37.44 
 
 		 213 aa  154  9e-37  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  39.15 
 
 		 214 aa  154  1e-36  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  42.79 
 
 		 220 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.17 
 
 		 223 aa  153  2e-36  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  39.91 
 
 		 212 aa  153  2.9999999999999998e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.09 
 
 		 234 aa  152  4e-36  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  43.06 
 
 		 230 aa  152  4e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  38.6 
 
 		 219 aa  152  5e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  40.29 
 
 		 214 aa  150  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  42.51 
 
 		 213 aa  150  1e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  41.51 
 
 		 233 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.23 
 
 		 221 aa  150  2e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
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