| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4485 |
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| Symbol | |
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| ID | 5736336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5742996 |
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| End bp | 5743637 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281648 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001547245 |
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| Protein GI | 159900998 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.310872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAACA TTATCCGAAT TATGCTTGTT GACGACCATG CCATTGTGCG TGAAGGGCTG
CGTACCCTCT TAGCCGAAGA TACCGAATTT TTGATTGTCG GCGAGGCTCA AAATGGAGCC
GACGCGATCG AATTGGCAGC AGTTGTGCGG CCACATGTTA TTTTGATGGA TCTTGTGATG
CCCAATGTCG ATGGCATTCA GGCCACTCAA GCGCTTCAAA GTCTCATGCC CAGCAGCCGA
ATTATCGTCC TGACCAGTTT TAGTGATGAT CAATGGGTCA GCAAGGCAAT TCAGGCGGGT
GCTAGTGGCT ACCTGCTGAA AAATGTGCTC AAGGCCGAGT TGTTTCTGGC AATTCGCACA
GTTGCGAACG GCCAGCCATT TTTACATGCC GAAGCCCAGC GCACCTTGAT GCGTCAATCA
ACCGCTCCGC CTTCGCTGTT GCCAAGCCTA ACTGAGCGTG AGCGCAGTGT GCTCGATGGG
ATTGTCGGCG GTTTGAGCAA TAAAGAAATT GCTCGTTCGC TGCATCTGAC CGAGGGCACA
GTTAAAGGCT ATGTGAGCAC CATACTCACC AAGTTGGCGG TGGCCGATCG AACTCAAGCG
GCGCTGTATG CCATCAAACA TGGCTTTGAT CTGACCCAGT AA
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| Protein sequence | MTNIIRIMLV DDHAIVREGL RTLLAEDTEF LIVGEAQNGA DAIELAAVVR PHVILMDLVM
PNVDGIQATQ ALQSLMPSSR IIVLTSFSDD QWVSKAIQAG ASGYLLKNVL KAELFLAIRT
VANGQPFLHA EAQRTLMRQS TAPPSLLPSL TERERSVLDG IVGGLSNKEI ARSLHLTEGT
VKGYVSTILT KLAVADRTQA ALYAIKHGFD LTQ
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