Gene Mkms_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1092 
Symbol 
ID4614470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1177500 
End bp1178186 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID639790769 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_937096 
Protein GI119867144 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.123414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGG ATCCCACGCC CCAAACCCGC AAGCCCCCCG TGACCGTGTT CCTCGTCGAC 
GACCACGAGG TGGTGCGTCG CGGGTTGATC GATGTGCTCA GCGCCGAACC GGACCTCGAG
GTGATCGGCG AAGCGGGCTC GGTCTCCGAG GCGCTGGCCC GCATCCCGGC GCTGCAGCCC
CAGGTCGCCG TGCTCGACGT GCGGCTGCCC GACGGCAACG GCATAGAGCT GTGCCGCGAT
CTCCTGTCGC GGCTGCCGGA TCTGCGGTGT CTGATGTTGA CGTCCTTCAC CTCCGACGAG
GCGATGATCG ACGCGATCCT CGCCGGCGCG AGTGGATACG TGATCAAGGA CATCAAGGGT
ATGGAACTGG CCAAGGCGAT CAGGGAGATC GGGGCGGGCC GGTCCCTGCT CGACAACCGG
GCGGCCGCCG CACTGATGGC CAAGCTGCGC CGGGCCACCG AGCATTCCGA TCCGCTGTCC
GGCCTCAGTG ATCAGGAGCG GGTCCTGCTG GGGTTGCTCG GAGAGGGGTT GACCAACAAG
CAGATCGCCG CGCGGATGTT CCTGTCGGAG AAGACGGTGA AGAACTACGT GTCGCGACTG
CTCGCGAAGC TGGGGGTGGA ACGTCGCACC CAGGCCGCGG TGTTCGTCTC CCGCCTCGAC
CGGTCGGACG GCGCCGCAGA AGGCTGA
 
Protein sequence
MTGDPTPQTR KPPVTVFLVD DHEVVRRGLI DVLSAEPDLE VIGEAGSVSE ALARIPALQP 
QVAVLDVRLP DGNGIELCRD LLSRLPDLRC LMLTSFTSDE AMIDAILAGA SGYVIKDIKG
MELAKAIREI GAGRSLLDNR AAAALMAKLR RATEHSDPLS GLSDQERVLL GLLGEGLTNK
QIAARMFLSE KTVKNYVSRL LAKLGVERRT QAAVFVSRLD RSDGAAEG