| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1971 |
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| Symbol | |
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| ID | 5670372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2368677 |
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| End bp | 2369327 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240892 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001506314 |
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| Protein GI | 158313806 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.356635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.773651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCCG CGGGGACGCA CACGGTACGG GTCTTCCTCC TTGACGACCA CGAGATCGTC
CGCCGTGGGG TCCGCGAGGT GCTCAGTGAC GCCAGCGGCA TCGAGGTCGT GGGCGAGGCG
TCGACCGGGG CCGAGGCGGC CGCCCTCGTC CCCCGCCTGC GGCCGGACGT CGCGCTGCTC
GACGCCCGGC TGGAGGACGG CAGCGGCATC GACGTCTGCC GGGACATCCA CGCGGCCTGC
CCGGAGGTCG GCTGTCTGAT CCTCACGTCC TACGACGACG ATGACGCGCT CTTCGCCGCG
ATCATGGCAG GGGCGGCGGG CTACCTGCTC AAGCAGATCC GCGGCACCGA CCTCGTGGGC
GCGATCCGGA CCATCGCGGC CGGCGGCTCC CTGCTCGACC CGGCCGTGAC CGCCAGGGTC
CTCGCCCGGC TCCGGGAGGG AACCGACGTG GGCCGGGCCT CGGCGGTGCT GAGCACCAGG
GAGCGGGAGA TCCTGGTCCT GATCGCCGAG GGCCTGACCA ACCGCCAGAT CGCCGGCCGG
CTGCACCTCT CCGAGAAGAC CGTGAAGAAC TACGTCTCGT CGATCCTCGA CAAGCTGGGC
CTGAGCAGCC GTACGCAGGC CGCCGTGTAC GCCGCGCGTC GCCACGCCTG A
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| Protein sequence | MDAAGTHTVR VFLLDDHEIV RRGVREVLSD ASGIEVVGEA STGAEAAALV PRLRPDVALL
DARLEDGSGI DVCRDIHAAC PEVGCLILTS YDDDDALFAA IMAGAAGYLL KQIRGTDLVG
AIRTIAAGGS LLDPAVTARV LARLREGTDV GRASAVLSTR EREILVLIAE GLTNRQIAGR
LHLSEKTVKN YVSSILDKLG LSSRTQAAVY AARRHA
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