| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1446 |
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| Symbol | |
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| ID | 8323529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1513109 |
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| End bp | 1513780 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952577 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003110042 |
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| Protein GI | 256372218 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTGCGCG TATTCCTCGT GGAGGACCAC GAGGTCGTGC GTCGAGGCAT TGCTCGCCTC
GTCGCTGAGG ACGACGGCTT TGAGGTCGTG GGCGAGGCCG GCTCTCTTGA GGAGGCGCGG
GCGAGAATCC CCTTGGCTGC TCCCGATGTC GCCGTGCTCG ATGTGCGCCT CCCGGATGGC
AGTGGTGTGG AGCTGTGTCG CGAGCTTCGC GCCGCACGAC CAGAGCTGCG TTGCCTGATG
TTGACGTCGT ACGCTGACGA CGAGGCGCTG TTCGCCTCGA TCATGGCGGG CGCATCTGGC
TATCTGCTCA AGCGGGTCCG GGTCGACGAG CTGCTCGATG CGCTGCGCCG CGTTGCCAAA
GGGGAGTCGC TCATCGACCC CGCGTTGACG GTACGGCTCC TCGAGCGCAT CCGGCATCCC
CAGGATGCGG GGGACGATCC GCTCGCGGAA CTCTCGCCGC AGGAGCGCCG GATCTTCGAT
CTGATCGTCG ATGGCAAGAC CAACCGCGAG ATCGCCGAGT CAGTCTTTCT CGCCGAGAAG
ACCGTCAAGA ACTACGTATC GAACATCCTG TCGAAGCTCG GCATGCACCA TCGAAGTGAG
ATCGCGGCGC TGGGCGCCCG ACTCGAAGAG CGCCGCCGAT CGCGCTCGTC AGCCGATCTC
GACGTTCGTT AG
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| Protein sequence | MVRVFLVEDH EVVRRGIARL VAEDDGFEVV GEAGSLEEAR ARIPLAAPDV AVLDVRLPDG
SGVELCRELR AARPELRCLM LTSYADDEAL FASIMAGASG YLLKRVRVDE LLDALRRVAK
GESLIDPALT VRLLERIRHP QDAGDDPLAE LSPQERRIFD LIVDGKTNRE IAESVFLAEK
TVKNYVSNIL SKLGMHHRSE IAALGARLEE RRRSRSSADL DVR
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