| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4979 |
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| Symbol | |
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| ID | 5673318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5974277 |
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| End bp | 5974972 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243833 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001509249 |
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| Protein GI | 158316741 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.889239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.507767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAGG TATCAACGGG CAGTTCCGAG GCCGGCGTGA CGCCCGCCCA GCAGTCGCGG
GCGGGCTCCA TCCGCGTCTT CCTTCTCGAC GACCACGAGG TCGTCCGCCG CGGGCTGCGT
GACCTGCTCT CCGAGGAATC CGACATCGTC GTGGTGGGCG AGGCCGGGCG CGCCGACGAG
GCGATCGCGG ACATCATCAT GTTGCGCCCG GACGTCGCCG TCCTGGACGC GCGGCTACAG
GAGGGCAGTG GGATCGAGGT GTGCCGGCAC GTCCGGTCGC ACGATCCGGA GATCGCCTGC
CTCATCCTCA CCTCGTTCGA CGACGAGGAC GCCCTGTTCA CCGCGATCAT GGCCGGGGCC
GCGGGCTACG TCCTGAAGCA GATCCGGGGC ACCGCGCTGG TCGACGCGGT GCGCCAGGTG
GCCGCCGGCC AGTCCCTGCT CGACCCGGCG GTCACCTCCC GGGTGCTGTT CCGGCTGCGC
GAGGGGCCGG TGGAGGACGA GCGCCTCGCC GGCCTCACCG ACCAGGAGCG GCGGATCCTC
GCGCTGATCG CCGAGGGGCT CACGAACCGG CAGATCGCCG CCCGCATGTT CCTGGCGGAG
AAGACGGTCA AGAACTACGT GTCGAGCATG CTGTCCAAGC TCGGGATGGA GAGCCGCACG
CAGGCGGCCG TGTTCGCCAC CAAGCTGTCG TCCTGA
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| Protein sequence | MSEVSTGSSE AGVTPAQQSR AGSIRVFLLD DHEVVRRGLR DLLSEESDIV VVGEAGRADE
AIADIIMLRP DVAVLDARLQ EGSGIEVCRH VRSHDPEIAC LILTSFDDED ALFTAIMAGA
AGYVLKQIRG TALVDAVRQV AAGQSLLDPA VTSRVLFRLR EGPVEDERLA GLTDQERRIL
ALIAEGLTNR QIAARMFLAE KTVKNYVSSM LSKLGMESRT QAAVFATKLS S
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