| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0094 |
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| Symbol | |
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| ID | 8331419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 98378 |
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| End bp | 99079 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953261 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003110890 |
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| Protein GI | 256389326 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0277195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACTCTG ATGCGGGGAA ACCGGGCATA CCGGACTCGA TCCGGGTCTT CCTGCTGGAC
GACCACGAGT TGGTGCGGCG CGGGGTCGCC GAAATGCTGA GCGCCGAGCC CGACATCGAC
GTGACCGGTC AGGCCGGCAG TGTGGCGCAG ACGGTGGCCG CGGCCGAGGC GGCGCGGCCG
GACGTCGCCC TGCTGGACGT GCGGCTTCCC GACGGATCGG GCATCGAGGT CTGCCGCGAG
CTGAAGTCGC GGATGCCCGG TCTGGGCTGC CTGATGCTGA CCTCTTTCTC CGACGACGAC
GCGCTGTTCG GCGCGATCAT GGCCGGCGCC GCGGGCTACG TGTTGAAGGA CATCCGGGGC
TCGGCGCTCG TCGACGCGGT CCGGACGGTG GCGCGCGGTG GCTCATTGCT GGACCCGACC
GCCACGGAGA AGCTGCTGAG CAGGCTGCGC GTCGGGATCG TGCCCGGGGA GGCCGATCGC
GAGGCAGCGG CGTCGAAACT GGCGACGCTG ACGGTGTCGG AGAAGCGGAT TCTGGAGCTG
ATCGCCGAGG GTCTCACCAA CCGCCAGATC GGCGAGCGGC TGAACCTGGC CGAGAAGACG
GTGAAGAACT ACATCACCGG GATCTTGGCG AAGCTGGCGA TGCAGCGGCG CACTCAGGCT
GCCGCGTTCG CTGTACGACA TCTTCCTGGG CGTTCGCAGT AG
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| Protein sequence | MHSDAGKPGI PDSIRVFLLD DHELVRRGVA EMLSAEPDID VTGQAGSVAQ TVAAAEAARP
DVALLDVRLP DGSGIEVCRE LKSRMPGLGC LMLTSFSDDD ALFGAIMAGA AGYVLKDIRG
SALVDAVRTV ARGGSLLDPT ATEKLLSRLR VGIVPGEADR EAAASKLATL TVSEKRILEL
IAEGLTNRQI GERLNLAEKT VKNYITGILA KLAMQRRTQA AAFAVRHLPG RSQ
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