Gene Tpau_4145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4145 
Symbol 
ID9158333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp4275779 
End bp4276429 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003649053 
Protein GI296141810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCG TCTTCCTCGT CGACGATCAT GAGATCGTGC GCAGGGGCCT GGCTGATCTG 
CTGACCTCGG ACGGGCGGCA TCGTGTGGTC GGGGAGGCGG CGACGGTGCG CGAGGCCCTG 
GCACGGATCC CGGCGGTCGC TCCTCAGGTC GCGGTGGTGG ACGTGCGGCT GCCCGACGGG 
TCCGGAATCG ATCTGATCCG CACCCTGCGT GATCAGCACC CGCGGCTGCC CTGTCTGGTA 
CTCACCTCGT ACTCGGACGA CGAGGCATTG CTCGACGCGA TCACGGCGGG CGCGCAGGGC 
TACGTGCTCA AACAGATCCG CGGCACCGAG TTGGTCTCGG CGATCGCCAC CGTCGCCGCC 
GGCGGATCGC TTCTCGATTC CGCGAGCACC GCCCGTGTGC TGCAACGCAT CCGCGATGCG 
GATCGGGTGC CATCGCTGGC CCAGGCGGGG CTGACCGGAC AGGAGGAAGC GGTCCTGGAA 
CTGCTCGGCG AGGGGCTGAC CAATAAGCAG ATCGCCGAGC GGATGTTCCT GGCGGAGAAA 
ACCGTCCGCA ACCACGTGAC CGGCGTACTG GCGAAGCTGG GCGTGGAGAA CCGGGTGCAG 
GCCGCGCTGC GCGCAGTGCA GTGGCGCGAG GCCCGCAGGA CTCGGCCGTG A
 
Protein sequence
MATVFLVDDH EIVRRGLADL LTSDGRHRVV GEAATVREAL ARIPAVAPQV AVVDVRLPDG 
SGIDLIRTLR DQHPRLPCLV LTSYSDDEAL LDAITAGAQG YVLKQIRGTE LVSAIATVAA 
GGSLLDSAST ARVLQRIRDA DRVPSLAQAG LTGQEEAVLE LLGEGLTNKQ IAERMFLAEK 
TVRNHVTGVL AKLGVENRVQ AALRAVQWRE ARRTRP