Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2290 |
Symbol | |
ID | 9146191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 2563409 |
End bp | 2564035 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003637380 |
Protein GI | 296130130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00802134 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000628596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGTCG ACGACCACGA GGTCGTCCGC CGCGGGATCG CCGAGGTCGT CGAGCGCACC GACGGGATGA CCGTCGTCGC CGAGGCCGGC TCCGTCGCCG ACGGCGTGCG CCGCGCGACC CTCGTGCGGC CGCAGGTCAT GCTCGTCGAC CTGCAGCTCC CGGACGGCAC GGGCATCGAT CTCATGAGGT CCGTGCGCGA GACGCTGCCC ACGGCGCGCG CGATCGTCCT GACGTCGTTC GACGACGACG ACGCACTGGC CGCCGCGCTC GACGCGGGCG CGTCCGCCTA CCTGCTCAAG AGCGTGCGTG GCGCCGAGAT CACGGACGTC ATCCGCGCCG TCGCGGCGGG CCGCACGCTG CTCGACGACC GGACGGTCGC ACGCCGCCGT GCGGGCCACG AGGACCCGAC GGAGTCGCTG ACGCCCAGCG AGCTGCGGGT CCTCGACCTC ATCGGCGAGG GCATGTCGAA CCGCGAGATC GCCGAGCGCC TCGGGGTGGC CGAGAAGACC GTGAAGAACC ACATCACGTC CCTGCTCGCG AAGATGGGCC TGCAGCGCCG CACGCAGGTC GCGGCGTGGG TCGCGTCGCG CAAGAACTCG GGCTGGCGGG CCGAGCCGGG GCACTGA
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Protein sequence | MIVDDHEVVR RGIAEVVERT DGMTVVAEAG SVADGVRRAT LVRPQVMLVD LQLPDGTGID LMRSVRETLP TARAIVLTSF DDDDALAAAL DAGASAYLLK SVRGAEITDV IRAVAAGRTL LDDRTVARRR AGHEDPTESL TPSELRVLDL IGEGMSNREI AERLGVAEKT VKNHITSLLA KMGLQRRTQV AAWVASRKNS GWRAEPGH
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