Gene Mmcs_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1076 
Symbol 
ID4109915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1173191 
End bp1173877 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID638030199 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_638246 
Protein GI108798049 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGG ATCCCACGCC CCAAACCCGC AAGCCCCCCG TGACCGTGTT CCTCGTCGAC 
GACCACGAGG TGGTGCGTCG CGGGTTGATC GATGTGCTCA GCGCCGAACC GGACCTCGAG
GTGATCGGCG AAGCGGGCTC GGTCTCCGAG GCGCTGGCCC GCATCCCGGC GCTGCAGCCC
CAGGTCGCCG TGCTCGACGT GCGGCTGCCC GACGGCAACG GCATAGAGCT GTGCCGCGAT
CTCCTGTCGC GGCTGCCGGA TCTGCGGTGT CTGATGTTGA CGTCCTTCAC CTCCGACGAG
GCGATGATCG ACGCGATCCT CGCCGGCGCG AGTGGATACG TGATCAAGGA CATCAAGGGT
ATGGAACTGG CCAAGGCGAT CAGGGAGATC GGGGCGGGCC GGTCCCTGCT CGACAACCGG
GCGGCCGCCG CACTGATGGC CAAGCTGCGC CGGGCCACCG AGCATTCCGA TCCGCTGTCC
GGCCTCAGTG ATCAGGAGCG GGTCCTGCTG GGGTTGCTCG GAGAGGGGTT GACCAACAAG
CAGATCGCCG CGCGGATGTT CCTGTCGGAG AAGACGGTGA AGAACTACGT GTCGCGACTG
CTCGCGAAGC TGGGGGTGGA ACGTCGCACC CAGGCCGCGG TGTTCGTCTC CCGCCTCGAC
CGGTCGGACG GCGCCGCAGA AGGCTGA
 
Protein sequence
MTGDPTPQTR KPPVTVFLVD DHEVVRRGLI DVLSAEPDLE VIGEAGSVSE ALARIPALQP 
QVAVLDVRLP DGNGIELCRD LLSRLPDLRC LMLTSFTSDE AMIDAILAGA SGYVIKDIKG
MELAKAIREI GAGRSLLDNR AAAALMAKLR RATEHSDPLS GLSDQERVLL GLLGEGLTNK
QIAARMFLSE KTVKNYVSRL LAKLGVERRT QAAVFVSRLD RSDGAAEG