More than 300 homologs were found in PanDaTox collection
for query gene Svir_22850 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 		 239 aa  475  1e-133  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  69.67 
 
 		 218 aa  306  2.0000000000000002e-82  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  73.68 
 
 		 222 aa  298  6e-80  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  64.45 
 
 		 219 aa  283  2.0000000000000002e-75  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  66.02 
 
 		 215 aa  281  5.000000000000001e-75  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal  1 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  66.02 
 
 		 215 aa  281  5.000000000000001e-75  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.171113 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  62.27 
 
 		 217 aa  281  5.000000000000001e-75  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  66.02 
 
 		 220 aa  281  6.000000000000001e-75  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  68.69 
 
 		 213 aa  280  1e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  65.05 
 
 		 216 aa  279  2e-74  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  63.68 
 
 		 221 aa  277  1e-73  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  64.56 
 
 		 212 aa  277  1e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  63.98 
 
 		 223 aa  270  1e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  66.16 
 
 		 214 aa  269  4e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  67.62 
 
 		 225 aa  267  8.999999999999999e-71  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  64.56 
 
 		 228 aa  265  2.9999999999999995e-70  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  64.56 
 
 		 228 aa  265  2.9999999999999995e-70  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  64.56 
 
 		 228 aa  265  2.9999999999999995e-70  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal  1 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  62.32 
 
 		 219 aa  259  3e-68  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  62.63 
 
 		 226 aa  257  9e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  64.95 
 
 		 216 aa  257  1e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal  1 
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  64.59 
 
 		 223 aa  252  3e-66  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  63.81 
 
 		 218 aa  247  1e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  57.35 
 
 		 212 aa  241  7e-63  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  58.74 
 
 		 212 aa  241  1e-62  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  57.94 
 
 		 216 aa  239  2e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  59.9 
 
 		 231 aa  240  2e-62  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  57.94 
 
 		 233 aa  239  2.9999999999999997e-62  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  57 
 
 		 211 aa  239  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  56.94 
 
 		 224 aa  235  4e-61  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  58.94 
 
 		 231 aa  235  4e-61  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  60.19 
 
 		 218 aa  234  8e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  60.4 
 
 		 209 aa  232  5e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  56.8 
 
 		 216 aa  231  9e-60  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  60.78 
 
 		 214 aa  231  9e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  56.86 
 
 		 213 aa  229  2e-59  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  54.63 
 
 		 218 aa  229  3e-59  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  55.87 
 
 		 233 aa  227  1e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  60.29 
 
 		 218 aa  225  4e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  57.42 
 
 		 223 aa  225  5.0000000000000005e-58  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  56.72 
 
 		 216 aa  219  3e-56  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  56.72 
 
 		 244 aa  219  3.9999999999999997e-56  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  53.92 
 
 		 216 aa  218  5e-56  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  53.23 
 
 		 254 aa  211  1e-53  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  49.53 
 
 		 226 aa  205  5e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  48.76 
 
 		 208 aa  188  5.999999999999999e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  45.59 
 
 		 219 aa  165  5e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  42.92 
 
 		 207 aa  163  2.0000000000000002e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  43.66 
 
 		 208 aa  162  4.0000000000000004e-39  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  41.18 
 
 		 217 aa  160  2e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.27 
 
 		 224 aa  157  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.0103975 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  41.23 
 
 		 242 aa  157  1e-37  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_008541  Arth_3459  two component LuxR family transcriptional regulator  44.85 
 
 		 212 aa  157  1e-37  Arthrobacter sp. FB24  Bacteria  normal  0.775478  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  42.06 
 
 		 214 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  41.07 
 
 		 221 aa  156  2e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  39.82 
 
 		 222 aa  156  2e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  40.98 
 
 		 214 aa  154  9e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  39.63 
 
 		 218 aa  154  9e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  39.22 
 
 		 216 aa  154  1e-36  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  43.06 
 
 		 221 aa  153  2e-36  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  43.27 
 
 		 215 aa  152  2.9999999999999998e-36  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  37.9 
 
 		 220 aa  152  5.9999999999999996e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  42.38 
 
 		 239 aa  151  8.999999999999999e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  40.38 
 
 		 234 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  39.2 
 
 		 213 aa  150  1e-35  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.76 
 
 		 303 aa  150  1e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.23 
 
 		 217 aa  150  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  39.52 
 
 		 253 aa  150  2e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.12 
 
 		 230 aa  150  2e-35  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  42.25 
 
 		 230 aa  149  3e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  38.39 
 
 		 215 aa  149  4e-35  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  45.63 
 
 		 208 aa  149  4e-35  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.39 
 
 		 215 aa  149  5e-35  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  44.34 
 
 		 221 aa  148  6e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  37.68 
 
 		 213 aa  148  7e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  43.06 
 
 		 216 aa  148  7e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  38.57 
 
 		 220 aa  148  8e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  38.39 
 
 		 215 aa  148  9e-35  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  38.39 
 
 		 215 aa  148  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  38.39 
 
 		 215 aa  148  1.0000000000000001e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  38.39 
 
 		 215 aa  148  1.0000000000000001e-34  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  38.39 
 
 		 215 aa  148  1.0000000000000001e-34  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  38.39 
 
 		 215 aa  148  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  41.83 
 
 		 213 aa  147  1.0000000000000001e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  38.16 
 
 		 213 aa  147  1.0000000000000001e-34  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  39.34 
 
 		 218 aa  147  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  38.73 
 
 		 210 aa  147  2.0000000000000003e-34  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  38.16 
 
 		 213 aa  147  2.0000000000000003e-34  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.85 
 
 		 234 aa  146  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  38.73 
 
 		 210 aa  147  2.0000000000000003e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  41.15 
 
 		 224 aa  146  2.0000000000000003e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  38.73 
 
 		 210 aa  146  3e-34  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  38.73 
 
 		 210 aa  146  3e-34  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  38.73 
 
 		 210 aa  146  3e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  38.73 
 
 		 210 aa  146  3e-34  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  38.73 
 
 		 210 aa  146  3e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  41.04 
 
 		 221 aa  146  3e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  40.67 
 
 		 218 aa  146  3e-34  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  38.97 
 
 		 211 aa  146  3e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  37.91 
 
 		 215 aa  146  3e-34  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>