More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_0454 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  100 
 
 
208 aa  413  9.999999999999999e-116  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  49.77 
 
 
217 aa  203  1e-51  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  51.89 
 
 
219 aa  198  3.9999999999999996e-50  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  45.12 
 
 
215 aa  189  2e-47  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  45.33 
 
 
215 aa  189  2.9999999999999997e-47  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  45.33 
 
 
215 aa  187  7e-47  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  45.33 
 
 
215 aa  187  9e-47  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  45.33 
 
 
215 aa  186  1e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  45.33 
 
 
215 aa  186  1e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  45.33 
 
 
215 aa  186  1e-46  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  45.33 
 
 
215 aa  186  1e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  45.33 
 
 
215 aa  186  1e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  47.42 
 
 
221 aa  186  2e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  44.19 
 
 
215 aa  182  2.0000000000000003e-45  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  46.12 
 
 
213 aa  182  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  50.52 
 
 
218 aa  181  6e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  43.48 
 
 
209 aa  174  8e-43  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  43.33 
 
 
212 aa  174  9.999999999999999e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  46.15 
 
 
213 aa  174  9.999999999999999e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  42.72 
 
 
210 aa  173  1.9999999999999998e-42  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  46.15 
 
 
213 aa  173  1.9999999999999998e-42  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  41.63 
 
 
216 aa  172  2.9999999999999996e-42  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  42.11 
 
 
210 aa  172  2.9999999999999996e-42  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  42.72 
 
 
210 aa  171  5.999999999999999e-42  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  41.55 
 
 
209 aa  171  6.999999999999999e-42  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  42.58 
 
 
210 aa  171  6.999999999999999e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  41.55 
 
 
209 aa  171  6.999999999999999e-42  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  42.23 
 
 
210 aa  171  9e-42  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  42.11 
 
 
217 aa  171  9e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  42.23 
 
 
210 aa  170  1e-41  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  45.15 
 
 
209 aa  171  1e-41  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  46.54 
 
 
225 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  42.23 
 
 
210 aa  169  4e-41  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  44.44 
 
 
212 aa  168  4e-41  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  45.15 
 
 
221 aa  167  9e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  43.27 
 
 
213 aa  167  1e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  42.65 
 
 
228 aa  166  2.9999999999999998e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  42.86 
 
 
209 aa  166  2.9999999999999998e-40  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  45.83 
 
 
208 aa  166  2.9999999999999998e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  43.69 
 
 
209 aa  165  5e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  43.69 
 
 
209 aa  165  5e-40  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  43.69 
 
 
209 aa  165  5e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  43.69 
 
 
209 aa  165  5e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  43.69 
 
 
209 aa  165  5e-40  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  44.79 
 
 
208 aa  164  6.9999999999999995e-40  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  42.79 
 
 
227 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  42.86 
 
 
211 aa  163  2.0000000000000002e-39  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  44.09 
 
 
227 aa  162  3e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  42.33 
 
 
234 aa  162  4.0000000000000004e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  46.67 
 
 
214 aa  161  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  37.9 
 
 
226 aa  161  6e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  42.4 
 
 
225 aa  160  1e-38  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  41.95 
 
 
207 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  43.46 
 
 
224 aa  159  2e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  42.65 
 
 
218 aa  159  2e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  42.92 
 
 
233 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  44.61 
 
 
235 aa  159  3e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  43.19 
 
 
232 aa  159  3e-38  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.04 
 
 
226 aa  159  3e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  40.85 
 
 
222 aa  159  3e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  43.44 
 
 
226 aa  158  5e-38  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  41.18 
 
 
228 aa  158  6e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  42.59 
 
 
234 aa  158  6e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  45.19 
 
 
215 aa  158  7e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.79 
 
 
226 aa  157  8e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  44.44 
 
 
215 aa  157  8e-38  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  42.13 
 
 
219 aa  157  9e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  36.79 
 
 
224 aa  157  1e-37  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  36.79 
 
 
224 aa  157  1e-37  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  43.72 
 
 
228 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  42.86 
 
 
224 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  37.26 
 
 
224 aa  157  1e-37  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  44.76 
 
 
227 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  44.13 
 
 
220 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  41.67 
 
 
241 aa  156  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  43.28 
 
 
207 aa  156  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.89 
 
 
230 aa  156  2e-37  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  43.48 
 
 
210 aa  156  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  37.85 
 
 
216 aa  156  2e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  42.65 
 
 
212 aa  156  2e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  39.34 
 
 
213 aa  156  2e-37  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  40.93 
 
 
222 aa  156  2e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  37.91 
 
 
213 aa  156  2e-37  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  41.67 
 
 
219 aa  155  3e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.64 
 
 
239 aa  156  3e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  40.49 
 
 
207 aa  155  4e-37  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  41.58 
 
 
209 aa  155  4e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  41.38 
 
 
209 aa  155  4e-37  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.79 
 
 
224 aa  155  5.0000000000000005e-37  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  40.28 
 
 
219 aa  155  5.0000000000000005e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  43.26 
 
 
225 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  42.79 
 
 
229 aa  155  6e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  42.25 
 
 
232 aa  154  6e-37  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  40.28 
 
 
219 aa  155  6e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  39.81 
 
 
211 aa  154  6e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
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