Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1229 |
Symbol | |
ID | 8664504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1259823 |
End bp | 1260461 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | response regulator receiver protein |
Protein accession | YP_003336970 |
Protein GI | 271962774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.643884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00799583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGCACCA TCAGGGTTCT GATCGTCGAC GACCACCGGC TGTTCCGCTC CGGTGTCCGC GCCGAGCTGG GCGACTCCAT CGAGGTGGTC GGGGAGGCCG AGGACGTCGA GTCCGCGGTC AGGACGATCG CGGAGCTCCA GCCCGACGTG GTCCTGCTCG ACGTGCACAT GCCGGGCGGC GGCGGCCAGG AGGTGCTCCG CCGCGTCCTC GGCTCCGGCT CCTCGGTCCG CTTCCTCGCG CTGTCGGTCT CCGACGCCGC CGAGGACGTC ATCGGCGTGA TCCGCGGCGG TGCCCGGGGA TATGTCACCA AGACCATCAG CGGTCGCGAG CTCACCGACG CGATCCGCCG GGTGGCCGAC GGCGACGCGG TCTTCTCCCC GAGACTGGCC GGCTTCGTGC TGGACGCCTT CGCCTCCAGC GAGGCTCCGC CGATCGACCC CGAGCTCGAC TCGCTGACCC AGCGCGAACG CGAGGTCCTG CGCCTGATCG CCCGGGGCTA CGCCTACAAG GAGATCGCCA AGGAGCTGTT CATCTCGGTC AAGACCGTGG AGACCCACGT CTCGTCCGTC CTGCGCAAGC TCCAGCTCTC CAACCGCCAC GAGCTCTCCC GGTGGGCCAC CGCACGACGC CTGGTCTGA
|
Protein sequence | MSTIRVLIVD DHRLFRSGVR AELGDSIEVV GEAEDVESAV RTIAELQPDV VLLDVHMPGG GGQEVLRRVL GSGSSVRFLA LSVSDAAEDV IGVIRGGARG YVTKTISGRE LTDAIRRVAD GDAVFSPRLA GFVLDAFASS EAPPIDPELD SLTQREREVL RLIARGYAYK EIAKELFISV KTVETHVSSV LRKLQLSNRH ELSRWATARR LV
|
| |