More than 300 homologs were found in PanDaTox collection
for query gene Namu_1255 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  100 
 
 		 219 aa  430  1e-120  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  80 
 
 		 216 aa  332  2e-90  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  76.96 
 
 		 229 aa  327  1.0000000000000001e-88  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  71.56 
 
 		 228 aa  297  8e-80  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  71.83 
 
 		 217 aa  297  1e-79  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  72.3 
 
 		 228 aa  291  4e-78  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  69.95 
 
 		 233 aa  280  9e-75  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  70.09 
 
 		 210 aa  280  1e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  71.16 
 
 		 212 aa  280  2e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  69.95 
 
 		 223 aa  279  3e-74  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  68.84 
 
 		 231 aa  274  6e-73  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  70.51 
 
 		 212 aa  274  8e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  68.49 
 
 		 223 aa  274  8e-73  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  65.2 
 
 		 226 aa  270  1e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  65.14 
 
 		 218 aa  265  5e-70  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  63.3 
 
 		 226 aa  253  2.0000000000000002e-66  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  61.93 
 
 		 228 aa  251  6e-66  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  60.36 
 
 		 218 aa  250  1e-65  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  62.56 
 
 		 232 aa  249  2e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  63.3 
 
 		 229 aa  248  4e-65  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  59.91 
 
 		 228 aa  246  3e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  61.99 
 
 		 217 aa  243  1.9999999999999999e-63  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  63.72 
 
 		 227 aa  241  5e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  59.73 
 
 		 226 aa  241  7e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.33 
 
 		 220 aa  235  5.0000000000000005e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  59.39 
 
 		 232 aa  234  1.0000000000000001e-60  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  63.55 
 
 		 223 aa  233  2.0000000000000002e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  60.7 
 
 		 228 aa  228  5e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  56.39 
 
 		 231 aa  216  2.9999999999999998e-55  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  43.13 
 
 		 213 aa  162  3e-39  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  41.94 
 
 		 218 aa  152  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  43.4 
 
 		 216 aa  151  7e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  41.89 
 
 		 223 aa  150  1e-35  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  40.36 
 
 		 231 aa  148  7e-35  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  39.25 
 
 		 221 aa  145  6e-34  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.55 
 
 		 236 aa  144  1e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.13 
 
 		 216 aa  142  3e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  41.71 
 
 		 217 aa  141  6e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  42.38 
 
 		 217 aa  139  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  40.38 
 
 		 244 aa  140  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  37.1 
 
 		 223 aa  140  1.9999999999999998e-32  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  40.78 
 
 		 216 aa  139  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  40.65 
 
 		 222 aa  140  1.9999999999999998e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  41.36 
 
 		 223 aa  138  7e-32  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  41.36 
 
 		 223 aa  138  7e-32  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  39.81 
 
 		 213 aa  137  1e-31  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  43.19 
 
 		 223 aa  137  1e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  40.55 
 
 		 211 aa  136  2e-31  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  41.63 
 
 		 207 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  38.5 
 
 		 237 aa  136  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  40.37 
 
 		 242 aa  136  3.0000000000000003e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  41.51 
 
 		 219 aa  135  4e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  42.5 
 
 		 218 aa  134  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  39.73 
 
 		 303 aa  134  9.999999999999999e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  35.51 
 
 		 217 aa  133  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_008781  Pnap_3764  two component LuxR family transcriptional regulator  36.96 
 
 		 232 aa  133  1.9999999999999998e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  37.85 
 
 		 233 aa  132  3.9999999999999996e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.7 
 
 		 234 aa  132  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  33.81 
 
 		 219 aa  132  3.9999999999999996e-30  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  39.08 
 
 		 256 aa  132  3.9999999999999996e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  38.18 
 
 		 216 aa  132  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  37.61 
 
 		 237 aa  132  5e-30  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.56 
 
 		 253 aa  132  6e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  38.76 
 
 		 206 aa  131  6.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  39.23 
 
 		 213 aa  130  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  38.24 
 
 		 213 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  39.13 
 
 		 220 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  35.68 
 
 		 218 aa  130  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  36.44 
 
 		 243 aa  129  3e-29  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1869  two component LuxR family transcriptional regulator  37.55 
 
 		 231 aa  129  3e-29  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  39.81 
 
 		 225 aa  129  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009077  Mjls_3046  two component LuxR family transcriptional regulator  41.71 
 
 		 218 aa  129  3e-29  Mycobacterium sp. JLS  Bacteria  normal  0.826568  normal  0.671191 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  40 
 
 		 216 aa  129  4.0000000000000003e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  36.28 
 
 		 218 aa  129  4.0000000000000003e-29  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  36.28 
 
 		 218 aa  129  4.0000000000000003e-29  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  36.23 
 
 		 221 aa  128  6e-29  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  37.38 
 
 		 212 aa  128  6e-29  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  38.99 
 
 		 221 aa  128  6e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40.38 
 
 		 219 aa  128  6e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_3030  two component LuxR family transcriptional regulator  41.23 
 
 		 218 aa  128  7.000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.640191  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  36.57 
 
 		 219 aa  128  7.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  38.64 
 
 		 234 aa  128  7.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_008705  Mkms_3089  two component LuxR family transcriptional regulator  41.23 
 
 		 218 aa  128  7.000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  0.109155  normal  1 
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  41.28 
 
 		 219 aa  128  8.000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  39.81 
 
 		 217 aa  128  9.000000000000001e-29  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  38.21 
 
 		 241 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  37.14 
 
 		 211 aa  127  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  36.67 
 
 		 224 aa  127  1.0000000000000001e-28  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  37.5 
 
 		 219 aa  127  1.0000000000000001e-28  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  36.1 
 
 		 226 aa  127  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  35.78 
 
 		 236 aa  127  2.0000000000000002e-28  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  36.84 
 
 		 257 aa  126  3e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  37.07 
 
 		 254 aa  126  3e-28  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  39.61 
 
 		 228 aa  126  3e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  37.8 
 
 		 231 aa  126  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  36.62 
 
 		 207 aa  125  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  35.71 
 
 		 225 aa  125  5e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  38.46 
 
 		 227 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  34.09 
 
 		 215 aa  125  6e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  38.39 
 
 		 219 aa  125  7e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>