Gene Tpau_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0915 
Symbol 
ID9155055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp935812 
End bp936483 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003645888 
Protein GI296138645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAACC GGGTGTTCCT GGTCGACGAT CACGGGGTGT TCCGCTCGGG CGTGCGCGCC 
GAGCTGGCTC GGGAGGCCAC CATCGAGGTG GTCGGCGAGG CCGGCACCGT CGCCGAGGCG 
GTGTCCGGGA TCCTTGAGAG CGCACCGGAT GTCGTGCTGC TGGATGTGCA CATGCCCGAC 
GGTGGTGGTG TGGCCGTGCT CCGCGGGGTC ACCGACGGTG CGCCGCGCGC CCGCCTGGAG 
AAGACACCGG TCTTCTTGGC GCTCAGTGTG TCCGACGCTG CCGAGGACGT GATCGCCACC 
ATCCGCGCCG GAGCGCGTGG CTACGTCACC AAGACCATCT CGGGTCCCGA ATTGGCCGAT 
GCCGTGCGGC GGGTGGCCGA CGGTGACGCC GTGTTCTCGC CTCGGCTGGC CGGTTTCGTG 
CTCGATTCGT TCACCGGGCG CTCGCCGGTG CCCGAGCCCG CGCTCGATCC GGAGCTGGAT 
TCGCTCACCC CACGTGAGCT GGAGGTGCTG CGTCTGCTGG CCCGCGGCTA CACCTACCGG 
GAGATCGCCG AGGATCTGTT CATCTCGGTG AAAACGGTCG AGACGCATGC CTCGAACGTG 
CTGCGGAAGA CGCAGCAGAG CAACAGGAAC GCGCTGACCC GCTGGGCGCA CACCCGGCAC 
CTCGCCGACT GA
 
Protein sequence
MTNRVFLVDD HGVFRSGVRA ELAREATIEV VGEAGTVAEA VSGILESAPD VVLLDVHMPD 
GGGVAVLRGV TDGAPRARLE KTPVFLALSV SDAAEDVIAT IRAGARGYVT KTISGPELAD 
AVRRVADGDA VFSPRLAGFV LDSFTGRSPV PEPALDPELD SLTPRELEVL RLLARGYTYR 
EIAEDLFISV KTVETHASNV LRKTQQSNRN ALTRWAHTRH LAD