More than 300 homologs were found in PanDaTox collection
for query gene Ndas_5233 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  100 
 
 
223 aa  437  9.999999999999999e-123  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  87.73 
 
 
233 aa  380  1e-105  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  85.1 
 
 
212 aa  352  2e-96  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  83.65 
 
 
212 aa  339  2e-92  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  82.78 
 
 
210 aa  335  2.9999999999999997e-91  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  70.81 
 
 
217 aa  292  2e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  71.77 
 
 
228 aa  290  1e-77  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  71.29 
 
 
228 aa  288  4e-77  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  72.3 
 
 
216 aa  283  1.0000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  68.95 
 
 
226 aa  281  6.000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  69.95 
 
 
219 aa  279  3e-74  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  70.28 
 
 
229 aa  277  8e-74  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  69.55 
 
 
227 aa  277  1e-73  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  72.43 
 
 
229 aa  275  3e-73  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  65.74 
 
 
218 aa  272  3e-72  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  66.35 
 
 
226 aa  265  2.9999999999999995e-70  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  66.67 
 
 
218 aa  264  8e-70  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.214241 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  65.14 
 
 
228 aa  262  3e-69  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  66.06 
 
 
223 aa  258  4e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  64.95 
 
 
231 aa  254  5e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_012669  Bcav_3033  two component transcriptional regulator, LuxR family  66.04 
 
 
232 aa  254  9e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.666463  hitchhiker  0.000783277 
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  66.98 
 
 
217 aa  252  3e-66  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  63.88 
 
 
232 aa  251  5.000000000000001e-66  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0710  two component transcriptional regulator, LuxR family  64.44 
 
 
226 aa  251  5.000000000000001e-66  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.614335  n/a   
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  60.81 
 
 
228 aa  249  2e-65  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal 
 
 
-
 
NC_009664  Krad_0277  two component transcriptional regulator, LuxR family  66.37 
 
 
228 aa  247  1e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0542563  normal  0.0298075 
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  65.88 
 
 
223 aa  246  2e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal 
 
 
-
 
NC_013521  Sked_28320  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  68.72 
 
 
220 aa  246  2e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  56.76 
 
 
231 aa  227  1e-58  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  41.36 
 
 
231 aa  163  2.0000000000000002e-39  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  45.02 
 
 
218 aa  158  6e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.33 
 
 
216 aa  151  8e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  42.36 
 
 
216 aa  151  8e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  44.76 
 
 
216 aa  150  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  44.44 
 
 
222 aa  150  2e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  40.71 
 
 
243 aa  149  4e-35  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.32 
 
 
236 aa  148  6e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  43.52 
 
 
223 aa  147  1.0000000000000001e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  39.05 
 
 
231 aa  147  2.0000000000000003e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  41.1 
 
 
217 aa  146  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  43.35 
 
 
207 aa  147  2.0000000000000003e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  43.52 
 
 
230 aa  146  2.0000000000000003e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  40.76 
 
 
213 aa  146  3e-34  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  43.35 
 
 
219 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  42.36 
 
 
217 aa  145  4.0000000000000006e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  38.94 
 
 
237 aa  144  7.0000000000000006e-34  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  40.85 
 
 
223 aa  144  8.000000000000001e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  39.22 
 
 
213 aa  144  8.000000000000001e-34  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  38.05 
 
 
221 aa  144  1e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.46 
 
 
234 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  39.38 
 
 
237 aa  143  2e-33  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  42.16 
 
 
220 aa  143  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  36.19 
 
 
213 aa  140  9.999999999999999e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  37.85 
 
 
253 aa  140  9.999999999999999e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38.28 
 
 
217 aa  140  1.9999999999999998e-32  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  41.12 
 
 
213 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  36.54 
 
 
241 aa  139  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  37.55 
 
 
256 aa  139  3.9999999999999997e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  38.65 
 
 
218 aa  139  4.999999999999999e-32  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  38.65 
 
 
218 aa  139  4.999999999999999e-32  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.67 
 
 
221 aa  138  6e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.07 
 
 
234 aa  138  6e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  37.79 
 
 
219 aa  138  7e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.68 
 
 
222 aa  138  7.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  41.54 
 
 
218 aa  138  7.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  42.06 
 
 
226 aa  137  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  38.29 
 
 
257 aa  137  2e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  39.05 
 
 
211 aa  135  3.0000000000000003e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  36.87 
 
 
242 aa  135  4e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  37.33 
 
 
219 aa  135  5e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  38.73 
 
 
213 aa  134  8e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  39.22 
 
 
214 aa  134  9.999999999999999e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_008146  Mmcs_3030  two component LuxR family transcriptional regulator  41.1 
 
 
218 aa  134  9.999999999999999e-31  Mycobacterium sp. MCS  Bacteria  normal  0.640191  n/a   
 
 
-
 
NC_008705  Mkms_3089  two component LuxR family transcriptional regulator  41.1 
 
 
218 aa  134  9.999999999999999e-31  Mycobacterium sp. KMS  Bacteria  normal  0.109155  normal 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  36.68 
 
 
219 aa  134  9.999999999999999e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.218307 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  35.71 
 
 
217 aa  133  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.38 
 
 
238 aa  133  1.9999999999999998e-30  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  40 
 
 
220 aa  133  1.9999999999999998e-30  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.18 
 
 
219 aa  133  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3046  two component LuxR family transcriptional regulator  41.1 
 
 
218 aa  133  1.9999999999999998e-30  Mycobacterium sp. JLS  Bacteria  normal  0.826568  normal  0.671191 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  34.31 
 
 
219 aa  133  3e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.81 
 
 
226 aa  132  3e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  38.92 
 
 
222 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  40.85 
 
 
241 aa  132  3.9999999999999996e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  33.97 
 
 
215 aa  132  5e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.27 
 
 
217 aa  132  6e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  37.39 
 
 
236 aa  131  6.999999999999999e-30  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  39.59 
 
 
218 aa  131  7.999999999999999e-30  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  33.65 
 
 
207 aa  131  7.999999999999999e-30  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  33.65 
 
 
207 aa  131  7.999999999999999e-30  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_013595  Sros_1446  response regulator receiver protein  39.9 
 
 
209 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0167897  normal  0.0778626 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  40.67 
 
 
214 aa  130  1.0000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  40.09 
 
 
221 aa  131  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  39.63 
 
 
223 aa  130  1.0000000000000001e-29  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  39.63 
 
 
223 aa  130  1.0000000000000001e-29  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  38.53 
 
 
213 aa  130  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.89 
 
 
217 aa  130  2.0000000000000002e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  34.31 
 
 
1648 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  40.58 
 
 
214 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.18 
 
 
303 aa  130  2.0000000000000002e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
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