Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0433 |
Symbol | |
ID | 4671484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 443042 |
End bp | 443713 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837563 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_984760 |
Protein GI | 121592864 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTC CCACCACGCT TTTCCTGATC GATGACCACA CCTTGCTGCG CCGCGGACTG GTGGCGCTGC TGTCCCAGCA GCCGGACCTG CGCGTGGTGG GCGAGGCCGG GGACGCCGCG GAGGCCCTGC GTCTGCTGCC TGCGCTGCGC CCCGACGTGA TCCTGCTGGA CAACCACCTG CCCGGTGTGC GCGGCGTGGA CGCCATCGCC GGCCTGCGCG AGGCGTCGCA GGGCAGCCGC GTGTTGATGC TCACGGTGAG CGAGGATGGG CAGGATCTGG CGGCCGCCTT GCGTAACGGC GCGCAGGGGT ATCTGCTCAA GACCATTGAC GGTGACCTGC TTGCGCAGGC GATACGGCGG GCTGCACGCG GCGAGCCGGT GGTCAGCCCC GAAATGATGG GCAAGCTGGT GGCGGCGTTC CAGTCCCAAG GGGCGCCCAC GCCCGAGCCC CTGCCCGAAG AGGAAGAGCC CGCGTCGGTG CTGTCGCCGC GCGAAGAAGA CGTGTTGCGC GAGATTGCGC GCGGTCTCAG CAACAAGGAA ATCGCACGTG CGCTCGACAT TGCCGAGACC ACCGTGAAGA TCCATGTGCA GCACATTCTG CGCAAGCTGG GACTGTCCTC GCGCGTGCAG GCGGCGGTCT ACGCCTCGGA CCGCCACCGC CTCACGGAAT AA
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Protein sequence | MNAPTTLFLI DDHTLLRRGL VALLSQQPDL RVVGEAGDAA EALRLLPALR PDVILLDNHL PGVRGVDAIA GLREASQGSR VLMLTVSEDG QDLAAALRNG AQGYLLKTID GDLLAQAIRR AARGEPVVSP EMMGKLVAAF QSQGAPTPEP LPEEEEPASV LSPREEDVLR EIARGLSNKE IARALDIAET TVKIHVQHIL RKLGLSSRVQ AAVYASDRHR LTE
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