| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0656 |
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| Symbol | |
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| ID | 8379841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 698748 |
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| End bp | 699404 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003393 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003160623 |
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| Protein GI | 256831896 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.214241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCC CTATCCGCAT CGCCATCATC GACGATCACG CCATGTTCCG AGCCGGAGTG
CGCGCCTCCC TGCCACCACG CTTTGACGTG GTCGCGGAAG CAGGTGACGT CGACAATGCA
ATCACTGTCC TTCATGACAC CACCCCCGAC GTTGTCCTCC TCGATGTTCA CCTCCCCGGT
GGCGCAGGCG GTGGCGGGGC TGAAATCCTC ACCCGCTGCC ACGCCCTCAA CGGGGACACA
AAATTTCTTG CACTCTCTGT CTCTGACGCA GCAGAAGATG TGGTCGCAGT CATTCGGGCC
GGCGCTCGCG GGTACGTGAC AAAAAATATC GCCCCTGACG AACTTGCTGA TGCGATGGTG
CGGGTTCGGG ATGGTGACGC AGTTTTTTCG CCGCGACTAG CAGGCTTCGT GTTGGATGCG
TTTGGAACCC AACACGCTGA CATTGCGACC ACAGATGATG AGCTTGATCG TCTCAGCGCC
CGGGAACAAG AAGTGATGCG TTTGATTGCA CGGGGGTATG CCTACCGTGA GGTGGCGTCG
GAGTTGTTCA TTTCGGTGAA GACTGTGGAG TCTCACGTCT CAGCGGTGTT GCGCAAGCTC
CAGTTGTCGT CTCGCCATGA GTTGACCAGG TGGGCGGCTG CACGCCGGCT TTTGTGA
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| Protein sequence | MSIPIRIAII DDHAMFRAGV RASLPPRFDV VAEAGDVDNA ITVLHDTTPD VVLLDVHLPG
GAGGGGAEIL TRCHALNGDT KFLALSVSDA AEDVVAVIRA GARGYVTKNI APDELADAMV
RVRDGDAVFS PRLAGFVLDA FGTQHADIAT TDDELDRLSA REQEVMRLIA RGYAYREVAS
ELFISVKTVE SHVSAVLRKL QLSSRHELTR WAAARRLL
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