More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6596 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  100 
 
 		 249 aa  477  1e-134  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  59.56 
 
 		 216 aa  237  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  59.38 
 
 		 218 aa  230  2e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  56.5 
 
 		 219 aa  219  3e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.95 
 
 		 216 aa  215  5e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  56.05 
 
 		 217 aa  214  9.999999999999999e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  54.46 
 
 		 222 aa  207  1e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  52.91 
 
 		 217 aa  207  1e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  53.36 
 
 		 216 aa  203  2e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  52.68 
 
 		 207 aa  201  9.999999999999999e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_009077  Mjls_3046  two component LuxR family transcriptional regulator  55.36 
 
 		 218 aa  185  5e-46  Mycobacterium sp. JLS  Bacteria  normal  0.826568  normal  0.671191 
 
 
-
 
NC_008146  Mmcs_3030  two component LuxR family transcriptional regulator  55.36 
 
 		 218 aa  184  9e-46  Mycobacterium sp. MCS  Bacteria  normal  0.640191  n/a   
 
 
-
 
NC_008705  Mkms_3089  two component LuxR family transcriptional regulator  55.36 
 
 		 218 aa  184  9e-46  Mycobacterium sp. KMS  Bacteria  normal  0.109155  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  39.32 
 
 		 234 aa  156  4e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.27 
 
 		 234 aa  153  2e-36  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  40.89 
 
 		 238 aa  152  5.9999999999999996e-36  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.66 
 
 		 236 aa  150  2e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  40.44 
 
 		 250 aa  149  6e-35  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  41.67 
 
 		 242 aa  147  2.0000000000000003e-34  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  39.82 
 
 		 237 aa  146  2.0000000000000003e-34  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  40.09 
 
 		 213 aa  147  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.91 
 
 		 253 aa  145  7.0000000000000006e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  38.91 
 
 		 237 aa  143  2e-33  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  39.37 
 
 		 303 aa  142  4e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  41.2 
 
 		 210 aa  139  3e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  40.17 
 
 		 233 aa  139  6e-32  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  39.19 
 
 		 225 aa  138  7e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  42.31 
 
 		 228 aa  138  8.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  35.93 
 
 		 1648 aa  138  8.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  39.63 
 
 		 212 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  41.01 
 
 		 228 aa  135  4e-31  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  39.24 
 
 		 231 aa  135  6.0000000000000005e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  40.37 
 
 		 217 aa  135  7.000000000000001e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2710  two component transcriptional regulator, LuxR family  41.47 
 
 		 226 aa  134  1.9999999999999998e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0104012 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  36.49 
 
 		 231 aa  132  5e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  41.01 
 
 		 223 aa  132  5e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  40.52 
 
 		 226 aa  132  6e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  40.54 
 
 		 223 aa  131  7.999999999999999e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  39.63 
 
 		 228 aa  131  1.0000000000000001e-29  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  37.26 
 
 		 217 aa  130  2.0000000000000002e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  38.64 
 
 		 212 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.53 
 
 		 241 aa  130  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  34.84 
 
 		 214 aa  129  4.0000000000000003e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  40.17 
 
 		 223 aa  128  1.0000000000000001e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  40.09 
 
 		 227 aa  127  1.0000000000000001e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  37.09 
 
 		 209 aa  127  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  39.44 
 
 		 208 aa  127  2.0000000000000002e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  41.35 
 
 		 218 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  36.04 
 
 		 212 aa  126  3e-28  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  33.78 
 
 		 219 aa  126  3e-28  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  40.09 
 
 		 225 aa  126  3e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  38.94 
 
 		 226 aa  125  5e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  40.93 
 
 		 207 aa  125  5e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.66 
 
 		 229 aa  125  6e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  33.92 
 
 		 221 aa  125  6e-28  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  35.59 
 
 		 217 aa  125  9e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.16 
 
 		 216 aa  124  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  39.64 
 
 		 219 aa  123  3e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  40.62 
 
 		 224 aa  122  4e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5726  two component transcriptional regulator, LuxR family  38.22 
 
 		 228 aa  123  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.451347  normal  1 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  33.79 
 
 		 221 aa  122  4e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  36.7 
 
 		 215 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  34.68 
 
 		 218 aa  122  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  40.18 
 
 		 221 aa  122  5e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  38.29 
 
 		 219 aa  122  5e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  38.33 
 
 		 216 aa  122  7e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  34.65 
 
 		 229 aa  120  9.999999999999999e-27  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.32 
 
 		 226 aa  120  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.46 
 
 		 222 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_17340  RNA polymerase sigma factor, sigma-70 family  39.47 
 
 		 232 aa  120  1.9999999999999998e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  34.7 
 
 		 219 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  38.57 
 
 		 226 aa  120  3e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  38.43 
 
 		 223 aa  120  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  34.53 
 
 		 218 aa  119  3.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  36.2 
 
 		 217 aa  119  4.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  30.84 
 
 		 226 aa  119  4.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  34.68 
 
 		 216 aa  119  4.9999999999999996e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  33.78 
 
 		 215 aa  119  4.9999999999999996e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.63 
 
 		 214 aa  119  6e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010816  BLD_1769  putative response regulator  36.77 
 
 		 231 aa  119  6e-26  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  34.43 
 
 		 243 aa  119  6e-26  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  34.25 
 
 		 219 aa  118  7.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  38.03 
 
 		 227 aa  118  9e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  34.23 
 
 		 216 aa  118  9.999999999999999e-26  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2543  two component transcriptional regulator, LuxR family  39.73 
 
 		 217 aa  118  9.999999999999999e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473476  normal  0.787864 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  32.74 
 
 		 215 aa  118  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  38.84 
 
 		 227 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  34.25 
 
 		 226 aa  118  9.999999999999999e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  39.01 
 
 		 225 aa  118  9.999999999999999e-26  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_008255  CHU_1317  response regulator  29.73 
 
 		 220 aa  117  9.999999999999999e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.89 
 
 		 224 aa  117  9.999999999999999e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.89 
 
 		 239 aa  117  9.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  34.21 
 
 		 229 aa  118  9.999999999999999e-26  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  32.31 
 
 		 242 aa  117  1.9999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.88 
 
 		 215 aa  117  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  37.39 
 
 		 219 aa  117  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  38.64 
 
 		 218 aa  117  1.9999999999999998e-25  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  36.44 
 
 		 233 aa  116  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  36.84 
 
 		 219 aa  116  3e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  38.01 
 
 		 221 aa  117  3e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
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