Gene Mkms_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3089 
Symbol 
ID4610924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3229884 
End bp3230540 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID639792760 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_939073 
Protein GI119869121 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.109155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG ACCAGCCGAC CACCGTGATG GTGGTCGACG ATCACCCCAT CTGGCGGGAC 
GCGGTGGCCC GCGACCTTGC CGACGAAGGC TTCTCCGTGG TCGCGACCGC CGACGGGGTG
GCGGCAGCGC GCCGCCGTGC CGCGGTGGTC AAACCGGCCG TCGTGGTGAT GGACATGCGG
TTGACCGACG GCGGCGGCGC CCAGGCCACC GCCGAGGTAC TGGCCGTCTC ACCGGCGTCC
CGGGTGCTGG TGCTGTCGGC GTCCGATGAG CGCGACGACG TCCTGGAGGC GGTGAAGGCC
GGCGCCACCG GCTATCTGGT CAAGAGCGCC TCCAAGGCCG AACTGAGCGC GGCGGTGCGG
GCCACCGCCG ACGGCCGTGC CGTCTTCACA CCGGGCCTCG CCGGACTCGT GCTGGGGGAG
TACCGCCGGA TCGCGCAGCG CCCGGACACC GGCGACTCGG CGCCGACCCT CACCGAACGC
GAGACCGAGG TGCTGCGCCA TGTGGCGAAG GGGTTGACGG CCAAACAGAT CGCCGCGCGG
CTGTCGCTGA GTCACCGCAC CGTCGAGAAC CACGTACAGG CCACCTTTCG CAAGCTGCAG
GTGGCCAACC GGGTCGAACT GGCGCGTTAC GCGATCGAAC ACGGCCTCGA CGAATAG
 
Protein sequence
MADDQPTTVM VVDDHPIWRD AVARDLADEG FSVVATADGV AAARRRAAVV KPAVVVMDMR 
LTDGGGAQAT AEVLAVSPAS RVLVLSASDE RDDVLEAVKA GATGYLVKSA SKAELSAAVR
ATADGRAVFT PGLAGLVLGE YRRIAQRPDT GDSAPTLTER ETEVLRHVAK GLTAKQIAAR
LSLSHRTVEN HVQATFRKLQ VANRVELARY AIEHGLDE