| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2613 |
|---|
| Symbol | |
|---|
| ID | 4114694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2636441 |
|---|
| End bp | 2637064 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037386 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_645342 |
|---|
| Protein GI | 108805405 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGA TCCGCATCCT CGTCGCCGAC GACCACCCCA TGCTGCGCGA GGGGCTCTCG
GCCGTGCTGG GCACCCGCCC CGGCTTCGAG GTCGTGGGAG AGGCCGGGGA CGGCGAGGAG
GTCCTGCGGC TGGCCTCCGG GCTGCGCCCG GACGTAGTGC TCCTGGACCT GGAGATGCCC
GGCACCGGCG GCGTCGAGGT CCTGCGGCGG CTGCGCGGGC TCGACGACCC GCCGAAGGTC
GTGGTCTTCA CCGCCTACGA CGACGAGCGC CTCCTCGAGG CGCTGCGCGA AGGGGCTCGG
GGGTGCCTGC TCAAGGGCGC CTCGCGGACC GAGATCTTCG ACGCCGTGCG CACCGTCCAC
GCGGGGGGCT CCGTGATCCC GCCGGAGATA ACGGCTCGAG TCCTGAAGGA GATGCGCGGC
GAGAGCGAGC CCCTGACGCC GCGGGAGCTG GAGGTGCTCC GGCTGGTCGC CCGCGGGCTG
ACCAACCGCG AGGTGGCGAG GGCGTTGTTT ATCAGCGAGC GGACGGTGAA GTTCCACGTC
TCCTCGCTGC TGGCGAAGCT CCGGGCGGAA AACCGCACCC AGGCCGTGGC CATCGCCCGC
GAGCGCGGCC TGCTGCGCGC CTGA
|
|---|
| Protein sequence | MEGIRILVAD DHPMLREGLS AVLGTRPGFE VVGEAGDGEE VLRLASGLRP DVVLLDLEMP
GTGGVEVLRR LRGLDDPPKV VVFTAYDDER LLEALREGAR GCLLKGASRT EIFDAVRTVH
AGGSVIPPEI TARVLKEMRG ESEPLTPREL EVLRLVARGL TNREVARALF ISERTVKFHV
SSLLAKLRAE NRTQAVAIAR ERGLLRA
|
|---|
| |