| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1579 |
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| Symbol | |
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| ID | 5539055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2029200 |
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| End bp | 2029928 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893717 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001431690 |
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| Protein GI | 156741561 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC GGATTCGTGT GCTGATTATT GATGACCATC CACTCTTCCG CCAGGGCATT
CGCTGGAGTC TCGAAGAAGC CGGCGATATG GAAGTGGTGG GTGAGGCGGA GAACGGGCAG
GAGGCGATCA AACTGGCGGA ACGCCTCTCG CCGGATGTCG TCCTGGTGGA CATTAACCTG
CCCGGCTTGA ATGGCCTGGA AGTGGCGCGC GTCATCAAAC GGCGCGAGCC ACGGGTCGGG
TTGATCGTCA TCAGCGTCTA CGAAGACGAT GAGCAACTCT TCCAGGCGAT CAAGGTCGGC
GCCGCCGCCT ATTCGTCGAA AGATGTCCAT CCTCGCGATC TGGTACGCAT GATCCGTGAA
GTCGCTCGCG GAAAATACCT GATTAATGAT AGTGTCATTG CCAAACCGCA TGTCGCCACG
CGCGTGCTCC ATCAGTTCCG TGAACTCGCC GCCACCGAGG ACGAACGCAC CAGCGCGCTC
TTCGCCCCAT TGACATCGCG CGAGATCGAG ATTCTCGACT GCATTGCCCG CGGCTTGTCG
AATAAGGAGA TCGCCACGCA ACTGTCGATC AGCGGGCAGA CGGTCAAGAA CCACATCACT
TCTATTCTGT CGAAACTTCA GGTCAACGAC CGGACGATGG CGGTTATCTA TGCAATCCAG
CGCGGTTGGA TCCGCATGGG ATACGATGGG CATCATAGCC ACGCGGTTGG TGAGAAGCGC
TCGAGTTAG
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| Protein sequence | MEQRIRVLII DDHPLFRQGI RWSLEEAGDM EVVGEAENGQ EAIKLAERLS PDVVLVDINL
PGLNGLEVAR VIKRREPRVG LIVISVYEDD EQLFQAIKVG AAAYSSKDVH PRDLVRMIRE
VARGKYLIND SVIAKPHVAT RVLHQFRELA ATEDERTSAL FAPLTSREIE ILDCIARGLS
NKEIATQLSI SGQTVKNHIT SILSKLQVND RTMAVIYAIQ RGWIRMGYDG HHSHAVGEKR
SS
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