Gene Amir_7055 details

Gene Information

• Locus tag: Amir_7055
• ID: 8331276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 8200968
• End bp: 8201627
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644947484
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003104693
• Protein GI: 256381033
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGCG TGACCGTGAT GGTGGTGGAC GACCACCCCC TGTGGCGCGA CGGTGTGGCG 
AGGGACCTCG CCGAGCGCGG TTTCCAGGTG GTCGCCACCG CCGCGGACGC GGGCTCGGCG 
GTGCGGATCG CGCGCGCCGT GCGGCCCGCC GTGGTGCTGA TGGACCTGAA CCTGGGCGAG 
GCGGCGTCGG GGGTCGACGC GACGCGGATG ATCGCCGGTG AGCTGGAGGG CACCAGGGTG 
CTGGTCCTGT CGGCGAGCGG CGAGCACGAC GACGTGCTGG AGGCGGTGAA GGCGGGCGCG 
TCGGGCTACC TGGTGAAGTC GGCGTCCGCG GAGGAGCTGG TGGAGGCGGT CAACCGGACG 
GCGGCGGGCG ACGCGGTGTT CACGTCCGGC CTGGCAGGGC TGGTGCTGGG GGAGTACCGC 
AGGATGGCGG CGGCCCCGGA CGAGGTGGAC CGGCCGCAGC TGACCGACCG GGAGACCGAG 
GTGCTGCGGC TGGTGGCGAA GGGCCTGACG GCGAGGCAGA TCGCGACCCG GCTGGTGATC 
TCGCACCGGA CGGTGGAGAA CCACGTGCAG TCGACGCTGC GGAAGCTGCA GCTGCACAAC 
CGGGTGGAGC TGGCGCGGTA CGCGATCGAG CACGGGCTGG ACGGGGACCC GGAGGGCTGA 

 

Protein sequence

MSSVTVMVVD DHPLWRDGVA RDLAERGFQV VATAADAGSA VRIARAVRPA VVLMDLNLGE 
AASGVDATRM IAGELEGTRV LVLSASGEHD DVLEAVKAGA SGYLVKSASA EELVEAVNRT 
AAGDAVFTSG LAGLVLGEYR RMAAAPDEVD RPQLTDRETE VLRLVAKGLT ARQIATRLVI 
SHRTVENHVQ STLRKLQLHN RVELARYAIE HGLDGDPEG