More than 300 homologs were found in PanDaTox collection
for query gene Aave_0654 on replicon NC_008752
Organism: Acidovorax citrulli AAC00-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  100 
 
 
256 aa  494  1e-139  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  72.57 
 
 
223 aa  318  3.9999999999999996e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  72.65 
 
 
223 aa  306  2.0000000000000002e-82  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  72.65 
 
 
223 aa  306  2.0000000000000002e-82  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  58.44 
 
 
231 aa  248  8e-65  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  56.9 
 
 
236 aa  232  5e-60  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1869  two component LuxR family transcriptional regulator  59.4 
 
 
231 aa  228  1e-58  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3764  two component LuxR family transcriptional regulator  58.47 
 
 
232 aa  225  5.0000000000000005e-58  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  52.46 
 
 
243 aa  219  3.9999999999999997e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  50.21 
 
 
221 aa  211  7.999999999999999e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  48.07 
 
 
217 aa  197  1.0000000000000001e-49  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.332036 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  45.73 
 
 
217 aa  192  4e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  46.78 
 
 
222 aa  192  5e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  50.85 
 
 
240 aa  188  8e-47  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  45.3 
 
 
218 aa  184  2.0000000000000003e-45  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  45.3 
 
 
218 aa  184  2.0000000000000003e-45  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  42.55 
 
 
231 aa  182  5.0000000000000004e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1736  DNA-binding response regulator NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2764  DNA-binding response regulator NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  0.922757  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2246  DNA-binding response regulator NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3072  DNA-binding response regulator NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2630  nitrate/nitrite response regulator protein NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia pseudomallei 668  Bacteria  normal  0.14617  n/a   
 
 
-
 
NC_009076  BURPS1106A_2686  nitrate/nitrite response regulator protein NarL  44.92 
 
 
233 aa  181  1e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1519  DNA-binding response regulator NarL  45.34 
 
 
233 aa  181  1e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  0.281442  n/a   
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  44.02 
 
 
233 aa  179  4.999999999999999e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  43.88 
 
 
221 aa  169  5e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  41.56 
 
 
234 aa  164  2.0000000000000002e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_011662  Tmz1t_4012  transcriptional regulator NarL  43.83 
 
 
214 aa  162  4.0000000000000004e-39  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  41.13 
 
 
253 aa  162  7e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  41.63 
 
 
219 aa  162  7e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  41.63 
 
 
219 aa  162  7e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  40 
 
 
241 aa  161  9e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  44.16 
 
 
236 aa  160  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  39.5 
 
 
242 aa  161  1e-38  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  40.26 
 
 
225 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  39.66 
 
 
212 aa  158  1e-37  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  45.02 
 
 
217 aa  157  2e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1399  transcriptional regulator NarL  39.15 
 
 
219 aa  155  5.0000000000000005e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0261138  normal 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  38.46 
 
 
226 aa  155  7e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  38.68 
 
 
237 aa  155  8e-37  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  38.46 
 
 
237 aa  154  1e-36  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  38.89 
 
 
217 aa  154  2e-36  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  39.22 
 
 
219 aa  153  2.9999999999999998e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.96 
 
 
234 aa  152  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  38.1 
 
 
219 aa  152  4e-36  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  40.17 
 
 
238 aa  150  2e-35  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  41.7 
 
 
212 aa  149  4e-35  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  35.32 
 
 
222 aa  148  7e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  36.64 
 
 
215 aa  148  8e-35  Burkholderia phymatum STM815  Bacteria  normal  normal  0.132796 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  40.08 
 
 
250 aa  146  2.0000000000000003e-34  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  40.6 
 
 
233 aa  147  2.0000000000000003e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  40.17 
 
 
222 aa  147  2.0000000000000003e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  38.3 
 
 
303 aa  145  4.0000000000000006e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  39.48 
 
 
213 aa  146  4.0000000000000006e-34  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  40.25 
 
 
223 aa  145  6e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  39.24 
 
 
213 aa  144  2e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  39.91 
 
 
227 aa  141  9e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  37.96 
 
 
223 aa  141  9e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  33.48 
 
 
228 aa  140  1.9999999999999998e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  37.07 
 
 
220 aa  139  3.9999999999999997e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  40.17 
 
 
216 aa  139  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  40 
 
 
212 aa  139  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.06 
 
 
216 aa  139  3.9999999999999997e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  38.26 
 
 
244 aa  139  4.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  40.6 
 
 
220 aa  139  6e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  38.72 
 
 
228 aa  139  6e-32  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  35.9 
 
 
209 aa  138  7e-32  Yersinia pestis Angola  Bacteria  normal  normal  0.0858473 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  35.9 
 
 
209 aa  138  7e-32  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  38.3 
 
 
217 aa  138  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2359  two component transcriptional regulator, LuxR family  38.46 
 
 
247 aa  138  7.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0990205  decreased coverage  0.00133027 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  40.77 
 
 
210 aa  138  8.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  35.47 
 
 
209 aa  137  1e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  37.66 
 
 
215 aa  136  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  36.52 
 
 
219 aa  136  3.0000000000000003e-31  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  38.3 
 
 
228 aa  136  4e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  37.4 
 
 
226 aa  136  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  37.23 
 
 
215 aa  135  5e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007204  Psyc_0602  nitrate/nitrite response regulator  35.65 
 
 
219 aa  135  6.0000000000000005e-31  Psychrobacter arcticus 273-4  Bacteria  normal  0.790372  normal 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  39.24 
 
 
216 aa  135  6.0000000000000005e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  37.66 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  37.23 
 
 
215 aa  135  7.000000000000001e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  39.41 
 
 
219 aa  135  7.000000000000001e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.96 
 
 
213 aa  135  8e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  33.91 
 
 
211 aa  134  9.999999999999999e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  36.78 
 
 
257 aa  134  9.999999999999999e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  37.23 
 
 
215 aa  134  9.999999999999999e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  40.26 
 
 
213 aa  134  1.9999999999999998e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  36.64 
 
 
218 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  32.03 
 
 
216 aa  133  3e-30  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  35.86 
 
 
229 aa  133  3e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  36.64 
 
 
216 aa  133  3e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  37.71 
 
 
210 aa  133  3e-30  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.02 
 
 
219 aa  132  3.9999999999999996e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  40.43 
 
 
234 aa  132  3.9999999999999996e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  42.67 
 
 
226 aa  132  5e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
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