| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3373 |
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| Symbol | |
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| ID | 3960945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3747928 |
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| End bp | 3748716 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918193 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_524613 |
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| Protein GI | 89902142 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.492418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGG CAGACAGCTA CCGCTATGCT CGCGGTAGAT TTGACAACAG CAAGGCAAAG
CAAGTGTGGC GTGTACTGGT GGTTGAGGAT GATCCGCAGA CGCGGGATTT TTTTTCGGGC
AGCGTGTCGC GCTGCGCCGA ACTGCTGCTG GCTGCCAGCG TGGGCACGGT GGCCGAGGCC
AAGGCCTGGC TGGATGACAG CGCGAACACG GTCGATGTGC TGCTCACCGA TCTGGGCCTG
CCCGATGGCA GCGGGCTGGA GGTGATCCGC CATGCGACGC GGCTGAACCC CGCCTGTGAG
CCGCTGGTGA TCTCGATGTT TGGTGATGAA GACAACGTGC TGGCCAGCAT CGAGGCCGGC
GCGCTGGGCT ACATCCACAA GGATTCGACG CCCGACGACA TTGCGCAGAC GATTTTGGAC
ATGCGGGCCG GCGCCTCTCC CATTTCTCCC ATGATCGCGC GCCGCGTGCT GTCCAAGTAC
CAGTCTGATC GTCGAGAGAA CAATAGGGTG CTAGCCCCCG TCCTATCATC GTCTATAGCT
ATAAAAAGCG AAGCGACTGA GGACGGTGAG GCGAAGTCGC AGCGCGGCCT GCTGTCGCCA
CGCGAACAGG AAGTTCTGGC CTTGATCGCC CGCGGCTTTT CGTATACGGA AATTGCCCGT
TTGCAGGGCT TGAGTGTTCA CACCGTGCAG ACGCATATCA AGAACCTGTA TGGAAAATTG
TCCGTGCACT CCAAAAGCGA GGCGGTGTTT GAAGCCACGC GCATGGGTTT GCTGTCGCCG
CATGACTGA
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| Protein sequence | MVKADSYRYA RGRFDNSKAK QVWRVLVVED DPQTRDFFSG SVSRCAELLL AASVGTVAEA
KAWLDDSANT VDVLLTDLGL PDGSGLEVIR HATRLNPACE PLVISMFGDE DNVLASIEAG
ALGYIHKDST PDDIAQTILD MRAGASPISP MIARRVLSKY QSDRRENNRV LAPVLSSSIA
IKSEATEDGE AKSQRGLLSP REQEVLALIA RGFSYTEIAR LQGLSVHTVQ THIKNLYGKL
SVHSKSEAVF EATRMGLLSP HD
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