| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3380 |
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| Symbol | |
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| ID | 5748965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3715604 |
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| End bp | 3716383 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298484 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001564403 |
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| Protein GI | 160898821 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.277634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCGACGTTCC CGCCGATGCC CGTCCCCTGA TCGCCGAGTC CCCTCGCGCC
CAGGGCATGC TGGGCACAGG TCTGAGCTCT GCCATGTGGC CCGACTACCT GGCGGGCCAG
CCCGACAAGC CCGTGCGGGT GCTGCTGGTG GACGACGATG CCCATATCCG CATGGTCATT
GCGCAGGAAA TCATGAACGA CCCGCGCACC CTGGTCGTGG CCCAGGCCGG CAGCGTGCGC
GACGGGCGCA AGGCCATCCG CCAGCATGAA TTCGACGTGA TGCTGGTGGA CCTGAACCTG
GGTGATGGCG AGGGCTTCGA GCTGCTGGAC ATGATGAAGA CCGTGCGGCC CACGGCCGAG
GCCGTCATCA TCTCCGTGAT GGAAAACGAC GAACAGGTGC TGCGCGCCTT CGAGCTGGGC
GCCACGGGCT ACCTCGTCAA GAACTCCTGG TTCGGCAACT ATCCGCAGGC CGTGCTGCAG
GTGGCCAATG GCGGCGCATC CGTCACTCCC AGCCTGGCGC GCAGATTGCT GCAGCGCTTC
GACAAGACCC AGGGCGCCGA GCCCAAGCGC CGCACGCCTG ACGAGGCAGA CCGCCTGTCC
ACCCGCGAGC GCGAGGTGCT GCGCATGGTC GCCAGCGGCT ATACCAGCGC CGAGATCGGC
TCGCGCCTGA TGATCAGCGC CATGACGGTC AACACGCACA TCAAGAACAT CTACCGCAAG
CTGCAGGTGC GCACACGCGC CCAGGCGGTA CGCTTTGCAT CGCTGCGCGG CCTGTTCTGA
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| Protein sequence | MNPSDVPADA RPLIAESPRA QGMLGTGLSS AMWPDYLAGQ PDKPVRVLLV DDDAHIRMVI
AQEIMNDPRT LVVAQAGSVR DGRKAIRQHE FDVMLVDLNL GDGEGFELLD MMKTVRPTAE
AVIISVMEND EQVLRAFELG ATGYLVKNSW FGNYPQAVLQ VANGGASVTP SLARRLLQRF
DKTQGAEPKR RTPDEADRLS TREREVLRMV ASGYTSAEIG SRLMISAMTV NTHIKNIYRK
LQVRTRAQAV RFASLRGLF
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