More than 300 homologs were found in PanDaTox collection
for query gene Daci_0377 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_0377  two component LuxR family transcriptional regulator  100 
 
 		 245 aa  484  1e-136  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_4084  two component LuxR family transcriptional regulator  49.59 
 
 		 246 aa  198  5e-50  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc3161  two component response regulator transcription regulator protein  50.22 
 
 		 231 aa  197  2.0000000000000003e-49  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  44.49 
 
 		 237 aa  164  1.0000000000000001e-39  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_007908  Rfer_3373  two component LuxR family transcriptional regulator  39.08 
 
 		 262 aa  157  1e-37  Rhodoferax ferrireducens T118  Bacteria  normal  0.492418  n/a   
 
 
-
 
NC_012791  Vapar_0939  two component transcriptional regulator, LuxR family  39.92 
 
 		 247 aa  151  1e-35  Variovorax paradoxus S110  Bacteria  normal  0.224899  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  41.36 
 
 		 211 aa  140  9.999999999999999e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  39.3 
 
 		 229 aa  140  1.9999999999999998e-32  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.55 
 
 		 234 aa  133  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  36.32 
 
 		 228 aa  130  2.0000000000000002e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_3952  two component LuxR family transcriptional regulator  40.34 
 
 		 222 aa  129  3e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.173353 
 
 
-
 
NC_008825  Mpe_A3237  response regulator  40.32 
 
 		 219 aa  130  3e-29  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  39.04 
 
 		 222 aa  130  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  36.2 
 
 		 222 aa  129  5.0000000000000004e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.09 
 
 		 215 aa  127  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.21 
 
 		 234 aa  127  2.0000000000000002e-28  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  34.09 
 
 		 215 aa  127  2.0000000000000002e-28  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  34.09 
 
 		 215 aa  125  4.0000000000000003e-28  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  38.43 
 
 		 230 aa  125  4.0000000000000003e-28  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  34.09 
 
 		 215 aa  126  4.0000000000000003e-28  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  33.64 
 
 		 215 aa  125  5e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  33.78 
 
 		 215 aa  125  6e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  33.78 
 
 		 215 aa  125  6e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  33.78 
 
 		 215 aa  125  6e-28  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  33.78 
 
 		 215 aa  125  6e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  37 
 
 		 303 aa  125  6e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  33.78 
 
 		 215 aa  125  6e-28  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  35.56 
 
 		 237 aa  125  6e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_010002  Daci_3380  two component LuxR family transcriptional regulator  35.81 
 
 		 259 aa  124  1e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  35.56 
 
 		 237 aa  124  2e-27  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  29.68 
 
 		 215 aa  120  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  36.44 
 
 		 262 aa  121  9.999999999999999e-27  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3592  two component transcriptional regulator, LuxR family  38.43 
 
 		 235 aa  121  9.999999999999999e-27  Variovorax paradoxus S110  Bacteria  normal  0.356082  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  36.94 
 
 		 209 aa  121  9.999999999999999e-27  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.02 
 
 		 253 aa  121  9.999999999999999e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3199  two component transcriptional regulator, LuxR family  35.43 
 
 		 262 aa  120  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1249  response regulator  34.16 
 
 		 245 aa  119  3e-26  Methylibium petroleiphilum PM1  Bacteria  normal  0.0947405  normal  0.0892263 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  33.93 
 
 		 220 aa  119  6e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  31.08 
 
 		 210 aa  119  6e-26  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_2743  two component LuxR family transcriptional regulator  39.01 
 
 		 215 aa  118  7e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.231043  normal  1 
 
 
-
 
NC_007802  Jann_3515  two component LuxR family transcriptional regulator  43.02 
 
 		 214 aa  118  7.999999999999999e-26  Jannaschia sp. CCS1  Bacteria  normal  0.150532  hitchhiker  0.00248481 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  40.57 
 
 		 231 aa  118  7.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  30.63 
 
 		 210 aa  117  9.999999999999999e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0612  two component LuxR family transcriptional regulator  36.56 
 
 		 231 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.105579 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  35.32 
 
 		 231 aa  117  9.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  35.71 
 
 		 211 aa  118  9.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  34.55 
 
 		 207 aa  117  1.9999999999999998e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  32.16 
 
 		 224 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  38.03 
 
 		 209 aa  117  1.9999999999999998e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  30.63 
 
 		 210 aa  117  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  30.63 
 
 		 224 aa  117  1.9999999999999998e-25  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  35.83 
 
 		 250 aa  116  3e-25  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  34.68 
 
 		 207 aa  116  3.9999999999999997e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.19 
 
 		 229 aa  115  5e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  32.88 
 
 		 220 aa  115  5e-25  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  36.24 
 
 		 214 aa  115  6e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  37.23 
 
 		 234 aa  115  6.9999999999999995e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  37.39 
 
 		 206 aa  115  7.999999999999999e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_007760  Adeh_2754  two component LuxR family transcriptional regulator  38.12 
 
 		 215 aa  115  8.999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.221671  n/a   
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  36.94 
 
 		 213 aa  115  8.999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  35.44 
 
 		 238 aa  114  1.0000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  36.16 
 
 		 210 aa  114  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  36.21 
 
 		 236 aa  114  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_011145  AnaeK_2846  two component transcriptional regulator, LuxR family  37.67 
 
 		 215 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.243379  n/a   
 
 
-
 
NC_011891  A2cp1_2938  two component transcriptional regulator, LuxR family  37.67 
 
 		 215 aa  114  2.0000000000000002e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  35.14 
 
 		 262 aa  114  2.0000000000000002e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  29.28 
 
 		 224 aa  112  4.0000000000000004e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  29.28 
 
 		 224 aa  112  4.0000000000000004e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  41.07 
 
 		 244 aa  112  4.0000000000000004e-24  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  37.1 
 
 		 212 aa  112  4.0000000000000004e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  32.88 
 
 		 213 aa  112  5e-24  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  29.73 
 
 		 224 aa  112  6e-24  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  32.44 
 
 		 222 aa  112  7.000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  34.68 
 
 		 223 aa  112  7.000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  34.27 
 
 		 211 aa  112  8.000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  35.21 
 
 		 219 aa  111  8.000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  31.98 
 
 		 225 aa  111  9e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  35.74 
 
 		 242 aa  111  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.42 
 
 		 224 aa  111  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  35.09 
 
 		 232 aa  111  1.0000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  34.94 
 
 		 241 aa  110  2.0000000000000002e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013037  Dfer_0722  two component transcriptional regulator, LuxR family  31.28 
 
 		 206 aa  110  2.0000000000000002e-23  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.511528  normal  0.608348 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  36.79 
 
 		 207 aa  110  3e-23  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  28.18 
 
 		 228 aa  110  3e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  36.49 
 
 		 217 aa  110  3e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  33.33 
 
 		 212 aa  109  3e-23  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  33.9 
 
 		 292 aa  109  4.0000000000000004e-23  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.350857 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.66 
 
 		 216 aa  109  4.0000000000000004e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  34.06 
 
 		 233 aa  108  5e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  35.16 
 
 		 221 aa  109  5e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  30.37 
 
 		 209 aa  109  5e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  31.75 
 
 		 223 aa  109  5e-23  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  29.6 
 
 		 215 aa  108  6e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  26.36 
 
 		 217 aa  108  7.000000000000001e-23  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  34.07 
 
 		 234 aa  108  7.000000000000001e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  27.6 
 
 		 232 aa  108  1e-22  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  36.25 
 
 		 242 aa  107  1e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  32.59 
 
 		 211 aa  107  1e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  34.07 
 
 		 212 aa  108  1e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  30.17 
 
 		 236 aa  107  1e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>