| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3628 |
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| Symbol | |
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| ID | 4690008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3858924 |
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| End bp | 3859802 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836641 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_983845 |
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| Protein GI | 121606516 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.350857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCATC TTTCTTCTGA CCCCCAAGCC AAACAGATGC TCGCCGCGCT GCCCGATGAC
GAGTGGCAGA GCTGGCTGCC GCCGCTTGAA CGCATAGACA TGCCTCTGGG TCAGGGGTCA
GACTTTTTGA CCAAAGGCAG CTCCATGCCG ACAAGCCATC AGCTAGCTCC CCATGGCGCC
TTGCAGCCCA TGTGGCCCAG CTTCCTGACG GGCCAGGCGG AGCAGCCGGT TCGTGTCCTG
CTGGTCGATG ACGATCCCCA CATGAGTCGT GTGATTGCCC ACGAATTGCT GGGCGATTTG
CGGATCAACC TGCTGGGCCA GGGCTGCAGC GTGCGGGAGG GCCGCCGCCT GATCAGCCAG
AACGAGTTCG ATGTGATGCT GGTCGACCTG AACCTGGGCG ACGGCAGCGG CTTTGAGCTG
ATTGAGTACA TGAAGGCCGT GCGCCCCATG GCCGAGGCAG TCGTCATCTC GTCCATGGAG
GACGCGCAGC ACGCGCTGCA TGCATTCGAG CTCGGAGCCA CCGGCTACCT GGTGAAAAAC
TCCTGGTTTG GCAACTTTCC CCAGGCGATT TTGCAGGTCG TCAATGGCGG CGCGTCGATC
ACGCCCAACC TTGCGCGCCG GCTGCTGAGC AAGTTCGAGC CGCCTCAAGC CAATGTTGAG
CCCCTGCCCG TGAACCAAGG CAAGGACAAC AAGCTGTCCG AGCGCGAACA ACAAGTCCTC
AAGCTGGTCG CCTCAGGCCA TAGCAGCACT GAAATCGGCG CACGGCTGGT CATCAGCTGG
CAGACCGCCA ACACGCACAT CAAGAACATT TACCGCAAGC TCAATGTGCG CAACCGCGCG
CAAGCAGTCA GTTTTGCGGC AAACCACGGG CTTTTTTAA
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| Protein sequence | MMHLSSDPQA KQMLAALPDD EWQSWLPPLE RIDMPLGQGS DFLTKGSSMP TSHQLAPHGA
LQPMWPSFLT GQAEQPVRVL LVDDDPHMSR VIAHELLGDL RINLLGQGCS VREGRRLISQ
NEFDVMLVDL NLGDGSGFEL IEYMKAVRPM AEAVVISSME DAQHALHAFE LGATGYLVKN
SWFGNFPQAI LQVVNGGASI TPNLARRLLS KFEPPQANVE PLPVNQGKDN KLSEREQQVL
KLVASGHSST EIGARLVISW QTANTHIKNI YRKLNVRNRA QAVSFAANHG LF
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