| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3515 |
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| Symbol | |
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| ID | 3935989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3571302 |
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| End bp | 3571946 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905889 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_511457 |
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| Protein GI | 89056006 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.150532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00248481 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGATC ATACTGTCCT CATCGTCGAG GATCGCCCCG ATATCGCGGA CAACCTTTGT
GCTGCCGTCA GCGCCACAGA CGGAATTGCG GTGGCTGCCG TGGCCGGGGA TCTGGACCGG
GGGTTGCAAC TTCTGTTCGA TCTCAAGCCC CGCGTGTTGC TGGTGGACAT TGGCCTGCCA
GACGGCAGCG GCGTGGATGC CGTGCGGGCG GCGGCCCAGG CCGATTGGAC TGTAGACGCC
TTGGTGATTT CCATCTTCGG GGACGAGGCT CGCGTGATCG AGGCCATTCG GGCCGGCGCG
AAGGGTTACG TGCTGAAGGG CGGCGATCTG AGCCATATTG GCGAAGACAT CCAGTCCGTC
CTCGCCGGTG GCAGCCCCAT CAGCCCCTCT ATCGCGCGCC ATCTTCTGGC GGTCCTCAAC
GATCCGCGCG ACGCACCCGC CATGCAGGAC GCACCCGCCC TGACCAACCG CGAGACGGAG
ATCCTTCGCT CCGTCTCCCG CGGCTACAAA CGCCACGAAA TTGCTGCCCA GCTGGGGATT
TCGGCCGGCA CCGTGGGCAA TCACATCACC AGCATCTATC GCAAGCTGGA GGTGTCCTCC
AACATCGAGG CGGTGGCCAT CGCCTCCCGG AGTGGCATGT TGTGA
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| Protein sequence | MTDHTVLIVE DRPDIADNLC AAVSATDGIA VAAVAGDLDR GLQLLFDLKP RVLLVDIGLP
DGSGVDAVRA AAQADWTVDA LVISIFGDEA RVIEAIRAGA KGYVLKGGDL SHIGEDIQSV
LAGGSPISPS IARHLLAVLN DPRDAPAMQD APALTNRETE ILRSVSRGYK RHEIAAQLGI
SAGTVGNHIT SIYRKLEVSS NIEAVAIASR SGML
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