| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4084 |
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| Symbol | |
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| ID | 4687666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4364542 |
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| End bp | 4365282 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837097 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_984296 |
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| Protein GI | 121606967 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA GCCCCGACGG CGCGCTCATC AGCGTCATGC TTGTAGAGGA CGACGTTCAT
TTTCAAAACG CCCTGATCGC GGCCATCGCG AGGGCGCCCG ACATCCGGCT GGCAGCGCTT
GCGGGCAGCC GCGCCCAGGG GCTGCAAGCC TTGCGCGGCC CGCCCGCCGA CGTGCTGCTG
GTGGACCTGG GCCTGCCAGA CGGCTCGGGC ATCGACGTGA TTCGCGCCGC GCACAGCCTG
TGGCCGGGCT GCGCGGTGAT GGTCAGCACC ACCTTTGGCG ATGAGGCGCA TGTGCTGCAA
TCCATCGAAG CCGGCGCTTC GGGCTATTTG CTCAAGGACA GCGCGCCCGA GGACATGCTG
GATGAAATCC GCACCCTGCA CCAAGGCGGC AGCCCCATCA GCCCGATGAT TGCGCGGCAG
ATACTGAACC GCTTTCGCGA CCGGCCGGCG ATGCCTGCGC CCGCTGCCGC CAGCGCTTCG
GCTTTTGCGC AAGCGCAGCT TTGCGCGCCC GGCCTGCTGC CCGGTCCTGG CGTGCCTGAG
CAGGCGATGC TGTCGAGCCG CGAAATGGAA GTGCTGCAAC TGATCACCCG CGGCTTCACG
GCCGACGAAA TCGCCCGGCT GCTGCAGGTG TCCTCGCACA CCGTGCAAAC CTATGTGCGC
CGCATCTACA GCAAGCTCAA GGTCAGGTCC AAGGCCGAAG CGATTTACGA AGCCAGGCAG
CAGGGCATTC TGTCGGCCTG A
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| Protein sequence | MPPSPDGALI SVMLVEDDVH FQNALIAAIA RAPDIRLAAL AGSRAQGLQA LRGPPADVLL
VDLGLPDGSG IDVIRAAHSL WPGCAVMVST TFGDEAHVLQ SIEAGASGYL LKDSAPEDML
DEIRTLHQGG SPISPMIARQ ILNRFRDRPA MPAPAAASAS AFAQAQLCAP GLLPGPGVPE
QAMLSSREME VLQLITRGFT ADEIARLLQV SSHTVQTYVR RIYSKLKVRS KAEAIYEARQ
QGILSA
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