More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4160 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  100 
 
 		 215 aa  438  9.999999999999999e-123  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_013037  Dfer_0724  two component transcriptional regulator, LuxR family  44.19 
 
 		 210 aa  189  4e-47  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.836709 
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  47.32 
 
 		 222 aa  177  9e-44  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  40 
 
 		 211 aa  161  5.0000000000000005e-39  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  35.38 
 
 		 220 aa  146  3e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  36.7 
 
 		 223 aa  145  6e-34  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  36.94 
 
 		 222 aa  143  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  35.92 
 
 		 209 aa  141  9e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  38.5 
 
 		 219 aa  140  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  36.67 
 
 		 218 aa  140  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  35.85 
 
 		 210 aa  140  1.9999999999999998e-32  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  36.36 
 
 		 232 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  35.68 
 
 		 228 aa  139  3e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  38.1 
 
 		 228 aa  139  3e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  31.46 
 
 		 213 aa  138  6e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  38.5 
 
 		 218 aa  138  7e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  38.5 
 
 		 218 aa  138  7e-32  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  38.19 
 
 		 218 aa  138  7e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  37.67 
 
 		 215 aa  137  1e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  37.67 
 
 		 215 aa  137  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  37.67 
 
 		 215 aa  137  1e-31  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK5108  response regulator  37.67 
 
 		 215 aa  137  1e-31  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  37.67 
 
 		 215 aa  137  1e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  34.93 
 
 		 218 aa  137  1e-31  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  37.04 
 
 		 234 aa  137  1e-31  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  35.68 
 
 		 225 aa  137  1e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  37.21 
 
 		 221 aa  136  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  37.21 
 
 		 215 aa  137  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5556  two component transcriptional regulator, LuxR family  32.77 
 
 		 255 aa  137  2e-31  Variovorax paradoxus S110  Bacteria  normal  0.853701  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  36.71 
 
 		 227 aa  136  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  36.24 
 
 		 225 aa  136  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  35.07 
 
 		 220 aa  136  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  38.76 
 
 		 220 aa  135  3.0000000000000003e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  37.85 
 
 		 218 aa  136  3.0000000000000003e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  35.21 
 
 		 209 aa  135  4e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  35.05 
 
 		 226 aa  135  4e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  37.33 
 
 		 234 aa  135  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  38.03 
 
 		 225 aa  135  5e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.49 
 
 		 226 aa  135  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  35.68 
 
 		 207 aa  135  6.0000000000000005e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  38.03 
 
 		 218 aa  134  7.000000000000001e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  35.07 
 
 		 213 aa  134  7.000000000000001e-31  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  36.82 
 
 		 237 aa  134  8e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  34.72 
 
 		 218 aa  134  8e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  36.74 
 
 		 215 aa  134  9e-31  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  36.55 
 
 		 218 aa  134  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  39.53 
 
 		 218 aa  134  9.999999999999999e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  35.02 
 
 		 220 aa  134  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  33.33 
 
 		 225 aa  133  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  36.74 
 
 		 215 aa  133  1.9999999999999998e-30  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  36.84 
 
 		 213 aa  133  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_3507  two component transcriptional regulator, LuxR family  35.71 
 
 		 213 aa  133  1.9999999999999998e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.892641  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  31.43 
 
 		 217 aa  132  3e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  35.1 
 
 		 226 aa  133  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  34.6 
 
 		 209 aa  132  3e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.28 
 
 		 253 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  35.81 
 
 		 215 aa  132  3.9999999999999996e-30  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  36.19 
 
 		 224 aa  132  3.9999999999999996e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  37.91 
 
 		 224 aa  132  3.9999999999999996e-30  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  35 
 
 		 223 aa  132  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  35.27 
 
 		 217 aa  132  5e-30  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  31.8 
 
 		 224 aa  132  6e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  33.02 
 
 		 209 aa  131  7.999999999999999e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  31.16 
 
 		 222 aa  131  7.999999999999999e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  37.02 
 
 		 213 aa  131  9e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_003295  RSc3161  two component response regulator transcription regulator protein  36.36 
 
 		 231 aa  130  1.0000000000000001e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  36.57 
 
 		 227 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  33.02 
 
 		 212 aa  130  1.0000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  35.68 
 
 		 212 aa  130  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  36.79 
 
 		 213 aa  130  1.0000000000000001e-29  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_009483  Gura_1544  two component LuxR family transcriptional regulator  35.21 
 
 		 241 aa  130  1.0000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  35.41 
 
 		 214 aa  130  1.0000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  36.02 
 
 		 230 aa  130  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  33.8 
 
 		 222 aa  130  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  36.92 
 
 		 221 aa  130  1.0000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  34.25 
 
 		 227 aa  130  2.0000000000000002e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  35.12 
 
 		 217 aa  130  2.0000000000000002e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  35.19 
 
 		 218 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.58 
 
 		 230 aa  130  2.0000000000000002e-29  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  31.92 
 
 		 220 aa  130  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_011725  BCB4264_A3228  Two-component protein Kinase  33.95 
 
 		 595 aa  129  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2996  two component LuxR family transcriptional regulator  32.39 
 
 		 595 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.896317  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  33.94 
 
 		 221 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  33.8 
 
 		 210 aa  130  2.0000000000000002e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  34.55 
 
 		 220 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.94 
 
 		 224 aa  129  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  35.81 
 
 		 215 aa  129  3e-29  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  34.68 
 
 		 227 aa  129  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  35.59 
 
 		 234 aa  129  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  35.19 
 
 		 234 aa  129  3e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  33.18 
 
 		 222 aa  129  4.0000000000000003e-29  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B2026  Two-component protein Kinase  32.39 
 
 		 595 aa  129  4.0000000000000003e-29  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  34.1 
 
 		 230 aa  129  4.0000000000000003e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  34.26 
 
 		 219 aa  128  5.0000000000000004e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  35.21 
 
 		 250 aa  128  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  33.8 
 
 		 208 aa  128  6e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  34.7 
 
 		 236 aa  128  6e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  37.14 
 
 		 224 aa  128  7.000000000000001e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  37.14 
 
 		 224 aa  128  7.000000000000001e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  34.56 
 
 		 215 aa  128  7.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
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